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13_1_40cm_scaffold_21201

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_21201_1
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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1..93
DNA (93bp) protein (31aa)
Short-chain alcohol dehydrogenase {ECO:0000313|EMBL:AFY60999.1}; TaxID=195253 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain
13_1_40cm_scaffold_21201_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(120..419)
DNA (300bp) protein (100aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MG22_9EURY
protein of unknown function DUF358 Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_scaffold_21201_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(574..1536)
DNA (963bp) protein (321aa)
A/G-specific adenine glycosylase; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] Tax=RBG_16_Euryarchaeota_67_27_curated
A/G-specific adenine glycosylase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB94_ANASK
A/G-specific adenine glycosylase
13_1_40cm_scaffold_21201_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(1705..2388)
DNA (684bp) protein (228aa)
DNA-(Apurinic or apyrimidinic site) lyase; K03653 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
thermostable 8-oxoguanine DNA glycosylase id=18248969 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
DNA-(Apurinic or apyrimidinic site) lyase
13_1_40cm_scaffold_21201_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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2497..3018
DNA (522bp) protein (174aa)
putative nickel-containing superoxide dismutase (EC:1.15.1.1)
Putative nickel-containing superoxide dismutase n=1 Tax=Polaribacter irgensii 23-P RepID=A4C131_9FLAO id=72002 bin=ACD50 species=Polaribacter irgensii genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
nickel-dependent superoxide dismutase Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_scaffold_21201_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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3034..3339
DNA (306bp) protein (102aa)
nickel-type superoxide dismutase maturation protease Tax=RBG_16_Euryarchaeota_68_12_curated
nickel-type superoxide dismutase maturation protease id=14630163 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin8_Chloro organism_group=Chloroflexi
nickel-type superoxide dismutase maturation protease
13_1_40cm_scaffold_21201_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(3346..4209)
DNA (864bp) protein (288aa)
oxidoreductase FAD/NAD(P)-binding; K03380 phenol 2-monooxygenase [EC:1.14.13.7] Tax=RBG_16_Euryarchaeota_68_13_curated
Oxidoreductase FAD/NAD(P)-binding protein id=3079203 bin=GWA2_OP3_52_12 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
oxidoreductase FAD/NAD(P)-binding protein
13_1_40cm_scaffold_21201_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(4238..4789)
DNA (552bp) protein (184aa)
MIP family channel protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
MIP family channel protein id=14630053 bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
MIP family channel protein
Displaying 8 items

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