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13_1_40cm_scaffold_45029

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_45029_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1..168
DNA (168bp) protein (56aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_scaffold_45029_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(158..1729)
DNA (1572bp) protein (524aa)
oligopeptide/dipeptide ABC transporter, ATP-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ABC transporter, ATP-binding component id=4397732 bin=GWC2_Chloroflexi_73_18 species=Mesorhizobium metallidurans genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
oligopeptide/dipeptide ABC transporter, ATP-binding protein
13_1_40cm_scaffold_45029_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(1881..2717)
DNA (837bp) protein (279aa)
oligopeptide/dipeptide ABC transporter ATPase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein id=24442405 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
oligopeptide/dipeptide ABC transporter ATPase
13_1_40cm_scaffold_45029_4
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

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comp(2901..3743)
DNA (843bp) protein (281aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component Tax=RBG_13_Euryarchaeota_57_23_curated
ABC-type dipeptide/oligopeptide/nickel transport system, permease component id=24442406 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
dipeptide/oligopeptide/nickel ABC transporter permease
13_1_40cm_scaffold_45029_5
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

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comp(3753..4766)
DNA (1014bp) protein (338aa)
ABC transporter permease; K02033 peptide/nickel transport system permease protein id=24442407 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ABC transporter, permease protein Tax=RBG_13_Euryarchaeota_57_23_curated
ABC transporter permease
13_1_40cm_scaffold_45029_6
unknown

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comp(4813..5217)
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_40cm_scaffold_45029_7
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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comp(5214..7358)
DNA (2145bp) protein (715aa)
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
PKD domain protein id=24442409 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
dipeptide ABC transporter substrate-binding protein
13_1_40cm_scaffold_45029_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(7525..8496)
DNA (972bp) protein (324aa)
rocA; 1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rocA; 1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
Aldehyde dehydrogenase n=1 Tax=uncultured prokaryote RepID=H5SL59_9ZZZZ
Displaying 8 items

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