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13_1_40cm_scaffold_4870

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4870_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2..289
DNA (288bp) protein (96aa)
PRC-barrel domain-containing protein n=1 Tax=mine drainage metagenome RepID=T1B6B1_9ZZZZ
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_scaffold_4870_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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311..1666
DNA (1356bp) protein (452aa)
beta-lactamase n=1 Tax=Candidatus Nitrosoarchaeum limnia RepID=UPI00026CE38F
hypothetical protein; K07021 Tax=RBG_16_Euryarchaeota_67_27_curated
RNA-metabolising metallo-beta-lactamase
13_1_40cm_scaffold_4870_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(1692..2450)
DNA (759bp) protein (253aa)
tRNA(1-methyladenosine) methyltransferase-like methyltransferase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TA06_9EURY
tRNA(1-methyladenosine) methyltransferase-related methyltransferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
tRNA(1-methyladenosine) methyltransferase-related methyltransferase
13_1_40cm_scaffold_4870_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2548..3708
DNA (1161bp) protein (387aa)
Branched chain amino acid transporter permease protein n=3 Tax=Haloferax RepID=M0FNV4_9EURY
hydrophobic amino acid ABC transporter permease Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
livH-6; branched chain amino acid transporter permease protein
13_1_40cm_scaffold_4870_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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3715..4680
DNA (966bp) protein (322aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJL2_9RHIZ
hydrophobic amino acid ABC transporter permease Tax=RBG_16_Euryarchaeota_68_13_curated
branched chain amino acid ABC transporter permease
13_1_40cm_scaffold_4870_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4677..5453
DNA (777bp) protein (259aa)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ13_9EURY
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ABC transporter
13_1_40cm_scaffold_4870_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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5456..6223
DNA (768bp) protein (256aa)
ABC transporter-like protein (EC:3.6.3.27); K11958 neutral amino acid transport system ATP-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUB4_9BACT
livF; ABC transporter
13_1_40cm_scaffold_4870_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(6277..7731)
DNA (1455bp) protein (485aa)
Hydrophobic amino acid ABC transporter (HAAT) family, amino acid-binding protein n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JRL6_SYNJA
neutral amino acid-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hydrophobic amino acid ABC transporter amino acid-binding protein
13_1_40cm_scaffold_4870_9
unknown

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7935..8153
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_scaffold_4870_10
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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8271..8804
DNA (534bp) protein (178aa)
TM2 domain containing protein+B7201 n=1 Tax=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) RepID=A4G0G5_METM5
hypothetical protein
TM2 domain containing protein+B7201 {ECO:0000313|EMBL:ABO35949.1}; TaxID=402880 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus
13_1_40cm_scaffold_4870_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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8821..9096
DNA (276bp) protein (92aa)
hmgA-1; hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.34 1.1.1.88); K00054 hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] Tax=RBG_16_Euryarchaeota_67_27_curated
hmgA-1; hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.34 1.1.1.88)
Hydroxymethylglutaryl-CoA reductase, degradative n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I942_METCZ
Displaying 11 items

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