ggKbase home page

13_1_40cm_scaffold_9110

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_9110_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..671)
DNA (669bp) protein (223aa)
Proline dehydrogenase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KKF9_9ARCH
proline dehydrogenase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
proline dehydrogenase
13_1_40cm_scaffold_9110_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(784..1230)
DNA (447bp) protein (149aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_scaffold_9110_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

1426..1920
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BWY4_METCG
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_40cm_scaffold_9110_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1991..2677
DNA (687bp) protein (229aa)
MIP family channel protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
MIP family channel protein id=14630053 bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
tonoplast intrinsic protein (Aquaporin)
13_1_40cm_scaffold_9110_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

2782..3576
DNA (795bp) protein (265aa)
oxidoreductase FAD/NAD(P)-binding; K03380 phenol 2-monooxygenase [EC:1.14.13.7] Tax=RBG_16_Euryarchaeota_68_13_curated
Oxidoreductase FAD/NAD(P)-binding protein id=3079203 bin=GWA2_OP3_52_12 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
oxidoreductase FAD/NAD(P)-binding protein
13_1_40cm_scaffold_9110_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3583..3888)
DNA (306bp) protein (102aa)
nickel-type superoxide dismutase maturation protease Tax=RBG_16_Euryarchaeota_68_12_curated
nickel-type superoxide dismutase maturation protease id=14630163 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin8_Chloro organism_group=Chloroflexi
peptidase S26 family protein
13_1_40cm_scaffold_9110_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(3900..4421)
DNA (522bp) protein (174aa)
putative nickel-containing superoxide dismutase (EC:1.15.1.1)
Putative nickel-containing superoxide dismutase n=1 Tax=Polaribacter irgensii 23-P RepID=A4C131_9FLAO id=72002 bin=ACD50 species=Polaribacter irgensii genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
nickel-dependent superoxide dismutase Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_scaffold_9110_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

4590..4988
DNA (399bp) protein (133aa)
DNA-(Apurinic or apyrimidinic site) lyase; K03653 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] Tax=RBG_16_Euryarchaeota_68_13_curated
N-glycosylase/DNA lyase; K03653 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] id=5047368 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Displaying 8 items

View Taxonomy