ggKbase home page

13_1_40cm_scaffold_9518

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_9518_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

2..952
DNA (951bp) protein (317aa)
Methionine adenosyltransferase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RBG_16_Euryarchaeota_67_27_curated
Methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IAW7_ACIB4
13_1_40cm_scaffold_9518_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

1018..2295
DNA (1278bp) protein (426aa)
Glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGV2_ACIB4
glycine/serine hydroxymethyltransferase Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_scaffold_9518_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(2297..2842)
DNA (546bp) protein (182aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
small GTP-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
small GTP-binding protein
13_1_40cm_scaffold_9518_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(2839..3153)
DNA (315bp) protein (105aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_scaffold_9518_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(3251..4075)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00035E82F3
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_scaffold_9518_6
unknown

Not on your lists

comp(4084..4572)
DNA (489bp) protein (163aa)

This feature has no annotations

13_1_40cm_scaffold_9518_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

4723..5586
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000361A1D2
putative phosphoserine phosphatase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative phosphoserine phosphatase
13_1_40cm_scaffold_9518_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists


5954..7297
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035F0085
signal recognition particle protein Srp54 Tax=RBG_16_Euryarchaeota_68_13_curated
signal recognition particle protein Srp54
13_1_40cm_scaffold_9518_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

7372..7995
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CUC2_METMJ
hypothetical protein; K07220 hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_scaffold_9518_10
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8030..9220
DNA (1191bp) protein (397aa)
Phosphate transporter n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CUC1_METMJ
phosphate transporter
Phosphate transporter {ECO:0000313|EMBL:ABN56971.1}; Flags: Precursor;; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source
13_1_40cm_scaffold_9518_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(9383..10135)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036653CE
DNA polymerase sliding clamp Tax=RBG_16_Euryarchaeota_68_13_curated
DNA polymerase sliding clamp
13_1_40cm_scaffold_9518_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(10188..10475)
DNA (288bp) protein (96aa)
transcription termination factor Tfs (EC:2.7.7.6); K03057 transcription elongation factor Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
transcription termination factor Tfs (EC:2.7.7.6)
DNA-directed RNA polymerase subunit n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RF97_METVM
13_1_40cm_scaffold_9518_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(10549..11046)
DNA (498bp) protein (166aa)
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 13 items

View Taxonomy