ggKbase home page

13_1_20cm_2_scaffold_42618

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_42618_1
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(1..363)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATV4_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_20cm_2_scaffold_42618_2
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(383..1471)
DNA (1089bp) protein (363aa)
Putative ATPases involved in chromosome partitioning n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATB5_9ARCH
Putative ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CDI05966.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
ParA/MinD ATPase-like protein
13_1_20cm_2_scaffold_42618_3
Marine Group I thaumarchaeote SCGC RSA3, Thaumarchaeota, Archaea

Not on your lists


1570..2229
DNA (660bp) protein (220aa)
Polyribonucleotide nucleotidyltransferase protein {ECO:0000313|EMBL:KFM17141.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KFM17141.1};; TaxID=1503183 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota;
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1F2_NITMS
13_1_20cm_2_scaffold_42618_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

2233..2421
DNA (189bp) protein (63aa)
Transcription elongation factor Spt4 n=2 Tax=Nitrosopumilaceae RepID=A9A1F3_NITMS
DNA-directed RNA polymerase subunit E RpoE2 Tax=CSP1_1_Thaumarchaeota
spt; Transcription elongation factor Spt4
13_1_20cm_2_scaffold_42618_5

Not on your lists

2578..3171
DNA (594bp) protein (198aa)
Nicotinate-nucleotide pyrophosphorylase [carboxylating] {ECO:0000256|PIRNR:PIRNR006250}; EC=2.4.2.19 {ECO:0000256|PIRNR:PIRNR006250};; Quinolinate phosphoribosyltransferase [decarboxylating] {ECO:0000
Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KKF5_9ARCH
nicotinate-nucleotide pyrophosphorylase
13_1_20cm_2_scaffold_42618_6
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3164..3424)
DNA (261bp) protein (87aa)
quinolinate synthetase (EC:2.5.1.72)
Quinolinate synthase A n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATC2_9ARCH
Quinolinate synthetase {ECO:0000313|EMBL:KFI17923.1}; Flags: Fragment;; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitro
13_1_20cm_2_scaffold_42618_7
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(3429..4031)
DNA (603bp) protein (201aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus
nadA; Quinolinate synthase A (EC:2.5.1.72)
Quinolinate synthase A n=2 Tax=Candidatus Nitrosoarchaeum RepID=S2EUE8_9ARCH
13_1_20cm_2_scaffold_42618_8

Not on your lists

comp(4126..4944)
DNA (819bp) protein (273aa)
Probable L-aspartate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01265}; EC=1.4.1.21 {ECO:0000256|HAMAP-Rule:MF_01265};; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marin
Probable L-aspartate dehydrogenase n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D4Q4_9ARCH rbh
aspartate dehydrogenase
13_1_20cm_2_scaffold_42618_9
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

5052..5474
DNA (423bp) protein (141aa)
Putative Proline dehydrogenase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV09_9ARCH
Putative Proline dehydrogenase {ECO:0000313|EMBL:CDI06405.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
proline dehydrogenase
Displaying 9 items

View Taxonomy