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13_1_20cm_2_scaffold_5042

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_5042_1

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comp(1..489)
DNA (489bp) protein (163aa)
GTP cyclohydrolase III {ECO:0000256|HAMAP-Rule:MF_00608}; EC=3.5.4.29 {ECO:0000256|HAMAP-Rule:MF_00608};; TaxID=1455950 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured ma
GTP cyclohydrolase III n=2 Tax=environmental samples RepID=B3T7T2_9ARCH
GTP cyclohydrolase IIA
13_1_20cm_2_scaffold_5042_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(491..901)
DNA (411bp) protein (137aa)
6,7-dimethyl-8-ribityllumazine synthase; K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=CSP1_1_Thaumarchaeota
hypothetical protein n=2 Tax=cellular organisms RepID=UPI00037ECACD
6,7-dimethyl-8-ribityllumazine synthase
13_1_20cm_2_scaffold_5042_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(904..1584)
DNA (681bp) protein (227aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K02858 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] Tax=CSP1_1_Thaumarchaeota
ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase (EC:4.1.99.12)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQW5_9ARCH
13_1_20cm_2_scaffold_5042_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1657..2247)
DNA (591bp) protein (197aa)
Riboflavin synthase, alpha subunit n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KLJ5_9ARCH
riboflavin synthase subunit alpha Tax=CSP1_1_Thaumarchaeota
riboflavin synthase subunit alpha
13_1_20cm_2_scaffold_5042_5

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comp(2322..3179)
DNA (858bp) protein (286aa)
Citryl-CoA lyase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B9G6_9ARCH rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN00214.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
citryl-CoA lyase
13_1_20cm_2_scaffold_5042_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3193..4242)
DNA (1050bp) protein (350aa)
Zn-dependent oxidoreductase (EC:1.1.1.1)
Zn-dependent oxidoreductase n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RYE5_CENSY rbh
Zn-dependent oxidoreductase Tax=CSP1_1_Thaumarchaeota
13_1_20cm_2_scaffold_5042_7
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(4286..4564)
DNA (279bp) protein (93aa)
Putative DNA-binding protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARB2_9ARCH
Putative DNA-binding protein {ECO:0000313|EMBL:CDI04963.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
DNA-binding protein
13_1_20cm_2_scaffold_5042_8
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4572..5024)
DNA (453bp) protein (151aa)
30S ribosomal protein S19e n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B5Z4_9ARCH
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474, ECO:0000313|EMBL:AJM91646.1}; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source
rps19e; 30S ribosomal protein S19e
13_1_20cm_2_scaffold_5042_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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5412..6080
DNA (669bp) protein (223aa)
Ribosomal RNA small subunit methyltransferase Nep1 n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A643_NITMS
ribosome biogenesis protein; K14568 essential for mitotic growth 1 Tax=CSP1_1_Thaumarchaeota
ribosome biogenesis protein
13_1_20cm_2_scaffold_5042_trna_1
unknown

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6101..6174
DNA (74bp)
transferRNA
13_1_20cm_2_scaffold_5042_10
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(6235..7269)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQV7_9ARCH rbh
Uncharacterized protein {ECO:0000313|EMBL:CDI04935.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
Displaying 11 items

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