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13_1_20cm_3_scaffold_1000

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1000_1
unknown

Not on your lists

comp(1..123)
DNA (123bp) protein (41aa)

This feature has no annotations

13_1_20cm_3_scaffold_1000_2
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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215..982
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P283_GRAMM
Uncharacterized protein {ECO:0000313|EMBL:AEU38229.1}; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella malle
hypothetical protein
13_1_20cm_3_scaffold_1000_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1054..1974
DNA (921bp) protein (307aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Paenibacillus lactis 154 RepID=G4HL37_9BACL
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:AHG89654.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KB
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein
13_1_20cm_3_scaffold_1000_4
unknown

Not on your lists

comp(1975..2841)
DNA (867bp) protein (289aa)
PDZ/DHR/GLGF domain protein
13_1_20cm_3_scaffold_1000_5
unknown

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comp(2846..3454)
DNA (609bp) protein (203aa)

This feature has no annotations

13_1_20cm_3_scaffold_1000_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3438..4013)
DNA (576bp) protein (192aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC29_GEMAT
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAH40056.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantia
RNA polymerase ECF-type sigma factor
13_1_20cm_3_scaffold_1000_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4188..5543
DNA (1356bp) protein (452aa)
Beta-lactamase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC30_GEMAT
Beta-lactamase {ECO:0000313|EMBL:AHG89650.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
beta-lactamase
13_1_20cm_3_scaffold_1000_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5610..5960
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC31_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG89649.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF59
13_1_20cm_3_scaffold_1000_9
unknown

Not on your lists

6151..6864
DNA (714bp) protein (238aa)

This feature has no annotations

13_1_20cm_3_scaffold_1000_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6874..8022)
DNA (1149bp) protein (383aa)
Putative ribonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC33_GEMAT
3'-5' exonuclease {ECO:0000313|EMBL:AHG89646.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
3'-5' exonuclease
13_1_20cm_3_scaffold_1000_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8097..8501
DNA (405bp) protein (135aa)
Thioesterase superfamily protein n=2 Tax=Brevibacillus RepID=L5MSP7_9BACL
4-hydroxybenzoyl-CoA thioesterase
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:AHG89644.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_3_scaffold_1000_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8491..9138
DNA (648bp) protein (216aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC36_GEMAT
Hypothetical membrane protein {ECO:0000313|EMBL:BAH40063.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
hypothetical membrane protein
13_1_20cm_3_scaffold_1000_13
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9482..10303)
DNA (822bp) protein (274aa)
Aldose 1-epimerase n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZP30_THASP
Aldose 1-epimerase {ECO:0000313|EMBL:ACK54788.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
aldose 1-epimerase
13_1_20cm_3_scaffold_1000_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10397..10660)
DNA (264bp) protein (88aa)
Ferredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC37_GEMAT
4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein {ECO:0000313|EMBL:AHG89643.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein
13_1_20cm_3_scaffold_1000_15
Bacteria

Not on your lists

comp(10761..11069)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI0003694B83
13_1_20cm_3_scaffold_1000_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11100..11405)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC38_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG89640.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function UPF0044
13_1_20cm_3_scaffold_1000_17
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11402..11986)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D8N9_9BURK
NODE_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96783.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys
Peptidase M23
13_1_20cm_3_scaffold_1000_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12011..13438)
DNA (1428bp) protein (476aa)
Phosphomethylpyrimidine synthase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZ35_SORCE
thiC; thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=GWC2_Gemmatimonadetes_71_10_curated
phosphomethylpyrimidine synthase
13_1_20cm_3_scaffold_1000_19
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

13647..14087
DNA (441bp) protein (147aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_20cm_3_scaffold_1000_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14122..14283
DNA (162bp) protein (54aa)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying 20 items

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