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13_1_20cm_3_scaffold_1016

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1016_1
unknown

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1..339
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_20cm_3_scaffold_1016_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(284..925)
DNA (642bp) protein (214aa)
Cyclase family protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBE8_THET1
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
cyclase family protein
13_1_20cm_3_scaffold_1016_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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946..1548
DNA (603bp) protein (201aa)
orotate phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Orotate phosphoribosyltransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2A7_SPHTD
orotate phosphoribosyltransferase
13_1_20cm_3_scaffold_1016_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1545..1895
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1M0_SPHTD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_3_scaffold_1016_5
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(1741..2481)
DNA (741bp) protein (247aa)
3-demethylubiquinone-9 3-methyltransferase Tax=CSP1_3_Armatimonadetes
3-demethylubiquinone-9 3-methyltransferase id=14630758 bin=bin9_gal15 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin9_gal15 organism_group=GAL15
methyltransferase type 11
13_1_20cm_3_scaffold_1016_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2639..3229
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0003187413
D-isomer specific 2-hydroxyacid dehydrogenase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
d-isomer specific 2-hydroxyacid dehydrogenase
13_1_20cm_3_scaffold_1016_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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3229..3534
DNA (306bp) protein (102aa)
gyaR; glyoxylate reductase (EC:1.1.1.26)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00037962B4
D-isomer specific 2-hydroxyacid dehydrogenase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_1016_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

3534..4184
DNA (651bp) protein (217aa)
hypothetical protein; K06889 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_1016_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4169..4426
DNA (258bp) protein (86aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_1016_10
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4486..4863
DNA (378bp) protein (126aa)
Fis family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI000263103B
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEG48719.1}; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sp
winged helix family two component transcriptional regulator
13_1_20cm_3_scaffold_1016_trna_1
unknown

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comp(4987..5058)
DNA (72bp)
transferRNA
13_1_20cm_3_scaffold_1016_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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5097..5930
DNA (834bp) protein (278aa)
Extradiol ring-cleavage dioxygenase class III protein subunit B n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U3C0_DEIML
extradiol ring-cleavage dioxygenase class III protein subunit B Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
extradiol ring-cleavage dioxygenase class III protein subunit B
13_1_20cm_3_scaffold_1016_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5983..7812
DNA (1830bp) protein (610aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000379AC3E
integral membrane sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
multi-sensor signal transduction histidine kinase
13_1_20cm_3_scaffold_1016_13
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7809..8162
DNA (354bp) protein (118aa)
Response regulator receiver domain protein (CheY-like) n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IL77_ANADE
Response regulator receiver domain protein (CheY-like) {ECO:0000313|EMBL:ABC82405.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobac
response regulator receiver domain-containing protein
13_1_20cm_3_scaffold_1016_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(8122..8670)
DNA (549bp) protein (183aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_1016_15

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comp(8721..9839)
DNA (1119bp) protein (373aa)
FAD dependent oxidoreductase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHT4_RHOMR
Uncharacterized protein {ECO:0000313|EMBL:KKM24005.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
FAD dependent oxidoreductase
13_1_20cm_3_scaffold_1016_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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9896..12205
DNA (2310bp) protein (770aa)
Endonuclease/exonuclease/phosphatase family n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9END1_SORC5
Endonuclease/exonuclease/phosphatase family {ECO:0000313|EMBL:CAN90845.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;"
endonuclease/exonuclease/phosphatase
Displaying 17 items

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