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13_1_20cm_3_scaffold_10940

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_10940_1
unknown

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1..78
DNA (78bp) protein (26aa)

This feature has no annotations

13_1_20cm_3_scaffold_10940_2
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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107..2545
DNA (2439bp) protein (813aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037840C2
Uncharacterized protein {ECO:0000313|EMBL:AII50542.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
hypothetical protein
13_1_20cm_3_scaffold_10940_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2542..3522
DNA (981bp) protein (327aa)
transketolase; K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
2-oxoisovalerate dehydrogenase beta subunit id=4899348 bin=GWC2_Chloroflexi_73_18 species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
transketolase
13_1_20cm_3_scaffold_10940_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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3534..5000
DNA (1467bp) protein (489aa)
branched-chain alpha-keto acid dehydrogenase E2 component; K09699 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
2-oxoglutarate dehydrogenase E2 component (EC:2.3.1.61)
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes n=1 Tax=uncultured Chloroflexi bacterium HF0200_06I16 RepID=E0XU06_9CHLR
13_1_20cm_3_scaffold_10940_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5295..5843
DNA (549bp) protein (183aa)
lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Lipoyl synthase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=LIPA_RUBXD
lipoyl synthase
13_1_20cm_3_scaffold_10940_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5836..6582
DNA (747bp) protein (249aa)
lipoate-protein ligase B (EC:2.3.1.181); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
lipB; lipoate-protein ligase B; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] id=14628551 bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
lipoate-protein ligase B
13_1_20cm_3_scaffold_10940_7
unknown

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6734..6931
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_20cm_3_scaffold_10940_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(6918..7355)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B657C2
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
amidohydrolase
13_1_20cm_3_scaffold_10940_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7436..7732)
DNA (297bp) protein (99aa)
GYD family protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=14425974 bin=bin1_lowGC species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
GYD family protein
13_1_20cm_3_scaffold_10940_10
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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7769..8086
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A5E0E
hypothetical protein Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein
13_1_20cm_3_scaffold_10940_11
unknown

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8184..9065
DNA (882bp) protein (294aa)

This feature has no annotations

13_1_20cm_3_scaffold_10940_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9101..9343)
DNA (243bp) protein (81aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF12_THET1
4Fe-4S ferredoxin Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
4Fe-4S ferredoxin
13_1_20cm_3_scaffold_10940_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9444..9782
DNA (339bp) protein (113aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_10940_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10051..10230
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCS8_GEOUR
hypothetical protein; K09763 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_10940_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10227..11126
DNA (900bp) protein (300aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=14630088 bin=bin8_Chloro species=Streptomyces albulus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi rbh
hypothetical protein
13_1_20cm_3_scaffold_10940_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11123..11434)
DNA (312bp) protein (104aa)
nitrogen-fixing NifU domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_10940_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11476..12252
DNA (777bp) protein (259aa)
carboxymethylenebutenolidase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003657413
carboxymethylenebutenolidase
13_1_20cm_3_scaffold_10940_18
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

12249..12872
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI0003779F8A
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:ABX05200.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosip
lysine exporter protein LysE/YggA
13_1_20cm_3_scaffold_10940_19
unknown

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12925..13308
DNA (384bp) protein (128aa)

This feature has no annotations

Displaying 19 items

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