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13_1_20cm_3_scaffold_11046

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_11046_1
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..606)
DNA (606bp) protein (202aa)
Membrane protein n=1 Tax=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) RepID=A1SBN2_SHEAM
Membrane protein {ECO:0000313|EMBL:KJS16369.1}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
membrane protein
13_1_20cm_3_scaffold_11046_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(603..1481)
DNA (879bp) protein (293aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0B0_9BACT
13_1_20cm_3_scaffold_11046_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1560..2546)
DNA (987bp) protein (329aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacte
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0B1_9BACT
surA; Parvulin-like peptidyl-prolyl isomerase
13_1_20cm_3_scaffold_11046_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(2552..4093)
DNA (1542bp) protein (514aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=497964 species="Bacteria; Ve
Transcription-repair-coupling factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CX01_9BACT
mfd; transcription-repair coupling factor mfd (superfamily II helicase)
13_1_20cm_3_scaffold_11046_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4081..5604)
DNA (1524bp) protein (508aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=497964 species="Bacteria; Ve
Transcription-repair-coupling factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CX01_9BACT
transcription-repair coupling factor
13_1_20cm_3_scaffold_11046_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5785..6588)
DNA (804bp) protein (268aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EDY17859.1}; EC=2.5.1.54 {ECO:0000313|EMBL:EDY17859.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Q8_9BACT
phospho-2-dehydro-3-deoxyheptonate aldolase
13_1_20cm_3_scaffold_11046_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6655..7290)
DNA (636bp) protein (212aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D044_9BACT
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EDY20358.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus El
ErfK/YbiS/YcfS/YnhG family protein
13_1_20cm_3_scaffold_11046_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7370..7774
DNA (405bp) protein (135aa)
Regulatory protein, FmdB family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D045_9BACT
Regulatory protein, FmdB family {ECO:0000313|EMBL:EDY20359.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_3_scaffold_11046_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7771..8508
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D046_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20360.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_3_scaffold_11046_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(8575..9057)
DNA (483bp) protein (161aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW04_9BACT
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:EDY21596.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavu
putative lytic murein transglycosylase
13_1_20cm_3_scaffold_11046_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9245..10414
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D047_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20361.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_3_scaffold_11046_12
Opitutaceae bacterium TAV5, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

10526..10642
DNA (117bp) protein (39aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IR90_9BACT
13_1_20cm_3_scaffold_11046_13
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10706..11767
DNA (1062bp) protein (354aa)
L-threonine aldolase {ECO:0000256|PIRNR:PIRNR038940}; EC=4.1.2.48 {ECO:0000256|PIRNR:PIRNR038940};; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacterac
threonine aldolase (EC:4.1.2.5)
L-threonine aldolase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF55_GEOUR
13_1_20cm_3_scaffold_11046_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11768..12286
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW54_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21646.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_3_scaffold_11046_15
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

12446..13213
DNA (768bp) protein (256aa)
Immunoglobulin I-set domain protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A0C9_OPITP
peptidase M10A and M12B matrixin and adamalysin Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
immunoglobulin I-set domain-containing protein
13_1_20cm_3_scaffold_11046_16

Not on your lists

13233..13868
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYP3_OPITP
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49260.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_3_scaffold_11046_17
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

13953..14543
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A0D0_OPITP
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_20cm_3_scaffold_11046_18
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

14767..16398
DNA (1632bp) protein (544aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVC5_9BACT
cytochrome c biogenesis protein transmembrane region Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
cytochrome c biogenesis protein transmembrane region
13_1_20cm_3_scaffold_11046_19
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

16395..16910
DNA (516bp) protein (172aa)
protein-disulfide reductase (EC:1.8.1.8) Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
Thiol:disulfide interchange protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKQ4_CHLTF
Thiol:disulfide interchange protein
13_1_20cm_3_scaffold_11046_20
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

16914..17522
DNA (609bp) protein (203aa)
alkyl hydroperoxide reductase n=1 Tax=Nevskia ramosa RepID=UPI0003B6F182
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
Displaying 20 items

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