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13_1_20cm_3_scaffold_1145

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1145_1
unknown

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3..143
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_20cm_3_scaffold_1145_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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226..2565
DNA (2340bp) protein (780aa)
peptidase M1 membrane alanine aminopeptidase; K01256 aminopeptidase N [EC:3.4.11.2] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Membrane alanyl aminopeptidase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFJ3_9BACT
aminopeptidase
13_1_20cm_3_scaffold_1145_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2818..3897
DNA (1080bp) protein (360aa)
6-phosphofructokinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAL2_GEMAT
6-phosphofructokinase {ECO:0000313|EMBL:AHG91972.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
6-phosphofructokinase
13_1_20cm_3_scaffold_1145_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4089..4478
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAL1_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH39809.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_1145_5
unknown

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4475..4951
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_20cm_3_scaffold_1145_6
unknown

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5053..5811
DNA (759bp) protein (253aa)

This feature has no annotations

13_1_20cm_3_scaffold_1145_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5884..8655
DNA (2772bp) protein (924aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAK8_GEMAT rbh
Helicase, DEAD/DEAH family {ECO:0000313|EMBL:AHG91970.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
helicase, DEAD/DEAH family
13_1_20cm_3_scaffold_1145_8
Aquifex aeolicus, Aquifex, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

8813..9217
DNA (405bp) protein (135aa)
Phosphoheptose isomerase {ECO:0000255|HAMAP-Rule:MF_00067}; EC=5.3.1.28 {ECO:0000255|HAMAP-Rule:MF_00067};; Sedoheptulose 7-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00067}; TaxID=224324 species=
Phosphoheptose isomerase n=1 Tax=Aquifex aeolicus (strain VF5) RepID=GMHA_AQUAE
gmhA; phosphoheptose isomerase
13_1_20cm_3_scaffold_1145_9
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9326..10372)
DNA (1047bp) protein (349aa)
muramoyltetrapeptide carboxypeptidase; K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] Tax=RBG_13_Deltaproteobacteria_65_10_curated
muramoyltetrapeptide carboxypeptidase (EC:3.4.17.13); K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] id=110013 bin=ACD73 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
peptidase U61 LD-carboxypeptidase A
13_1_20cm_3_scaffold_1145_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10422..11759
DNA (1338bp) protein (446aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000313|EMBL:BAH39800.1}; EC=1.17.1.2 {ECO:0000313|EMBL:BAH39800.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmat
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAK2_GEMAT
13_1_20cm_3_scaffold_1145_11
unknown

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11912..12130
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_20cm_3_scaffold_1145_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(12530..13699)
DNA (1170bp) protein (390aa)
kamA; Lysine 2,3-aminomutase Tax=RBG_16_Gemmatimonadetes_66_8_curated
L-lysine 2,3-aminomutase (Fragment) id=4552424 bin=GWF2_Lentisphaerae_52_8 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
kamA; Lysine 2,3-aminomutase
13_1_20cm_3_scaffold_1145_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(13826..14839)
DNA (1014bp) protein (338aa)
D-alanine--D-alanine ligase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
D-alanine-D-alanine ligase id=2663253 bin=GWC2_Ignavibacteria_56_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
D-alanine--D-alanine ligase
13_1_20cm_3_scaffold_1145_14
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(14871..15317)
DNA (447bp) protein (149aa)
D-alanine-D-alanine ligase-like protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
D-alanine-D-alanine ligase-like protein id=3454609 bin=GWC2_Deltaproteobacteria_42_51 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
D-alanine-D-alanine ligase-like protein
13_1_20cm_3_scaffold_1145_15
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15653..16009)
DNA (357bp) protein (119aa)
D-alanine-D-alanine ligase-like protein Tax=GWA2_Ignavibacteria_54_16_curated
D-alanine-D-alanine ligase-like protein id=2423737 bin=GWA2_Ignavibacteriae_54_16_partial species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
ddl; D-alanine--D-alanine ligase
13_1_20cm_3_scaffold_1145_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16371..17120)
DNA (750bp) protein (250aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408}
thyX; thymidylate synthase (EC:2.1.1.148)
Thymidylate synthase ThyX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J0_GEMAT
13_1_20cm_3_scaffold_1145_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17169..18767)
DNA (1599bp) protein (533aa)
Putative FAD linked oxidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J2_GEMAT
FAD linked oxidase domain protein {ECO:0000313|EMBL:AHG89899.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
FAD linked oxidase domain protein
13_1_20cm_3_scaffold_1145_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18803..19690)
DNA (888bp) protein (296aa)
hbdA; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157) Tax=RBG_16_Gemmatimonadetes_66_8_curated
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B0Y1_HERA2
3-hydroxybutyryl-CoA dehydrogenase
13_1_20cm_3_scaffold_1145_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19726..20586)
DNA (861bp) protein (287aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J6_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG89904.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_1145_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20603..21718)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J7_GEMAT rbh
Uncharacterized protein {ECO:0000313|EMBL:AHG89905.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_1145_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21763..22965)
DNA (1203bp) protein (401aa)
putative acyltransferase (EC:2.3.1.9); K07508 acetyl-CoA acyltransferase 2 [EC:2.3.1.16] Tax=RBG_16_Gemmatimonadetes_66_8_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJ20_9DELT
13_1_20cm_3_scaffold_1145_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(23875..24501)
DNA (627bp) protein (209aa)
Ribonuclease H n=1 Tax=uncultured organism RepID=E0X765_9ZZZZ
Ribonuclease H {ECO:0000313|EMBL:AHG89909.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribonuclease H
13_1_20cm_3_scaffold_1145_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(24498..24662)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K1_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG89910.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
Displaying 23 items

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