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13_1_20cm_3_scaffold_1197

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1197_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2..1120
DNA (1119bp) protein (373aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=14627863 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_20cm_3_scaffold_1197_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1201..1737)
DNA (537bp) protein (179aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_1197_3
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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comp(1832..3058)
DNA (1227bp) protein (409aa)
MFS/sugar transport protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EX92_9BACT
MFS/sugar transport protein {ECO:0000313|EMBL:CCW34911.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas
MFS/sugar transport protein
13_1_20cm_3_scaffold_1197_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

3153..4562
DNA (1410bp) protein (470aa)
hypothetical protein; K09760 DNA recombination protein RmuC Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Putative DNA recombination protein id=1871758 bin=GWB2_Proteobacteria_55_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
13_1_20cm_3_scaffold_1197_5

Not on your lists

5138..5701
DNA (564bp) protein (188aa)
Amidohydrolase n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K020_DEHLB
Marine sediment metagenome DNA, contig: S12H4_C01057 {ECO:0000313|EMBL:GAI71936.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
amidohydrolase
13_1_20cm_3_scaffold_1197_6
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

5685..6509
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B6CBCF
type 12 methyltransferase Tax=RBG_16_Chloroflexi_68_14_curated
type 12 methyltransferase
13_1_20cm_3_scaffold_1197_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6933..8033
DNA (1101bp) protein (367aa)
N-acyl-D-amino-acid deacylase (EC:3.5.1.81); K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0003782C38
d-aminoacylase
13_1_20cm_3_scaffold_1197_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8030..9091
DNA (1062bp) protein (354aa)
Uncharacterized protein n=2 Tax=Burkholderia RepID=A4JNN9_BURVG id=5225348 bin=16ft_combo_ws3_JS1 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_3_scaffold_1197_9
unknown

Not on your lists

comp(8908..9351)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_20cm_3_scaffold_1197_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9784..10050
DNA (267bp) protein (89aa)
Mandelate racemase/muconate lactonizing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Mandelate racemase/muconate lactonizing protein id=3268940 bin=GWF2_Planctomycete_41_51 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
ykfB; L-Ala-D/L-Glu epimerase
13_1_20cm_3_scaffold_1197_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10047..10733
DNA (687bp) protein (229aa)
Integral membrane protein TIGR01906 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Integral membrane protein TIGR01906 id=4289222 bin=GWC2_Chloroflexi_73_18 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
protein chain release factor A
13_1_20cm_3_scaffold_1197_12
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

10730..11833
DNA (1104bp) protein (368aa)
response regulator receiver protein; K02282 pilus assembly protein CpaE Tax=GWC2_RIF_CHLX_73_18_curated
Response regulator receiver protein id=3810776 bin=GWC2_Chloroflexi_73_18 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
response regulator receiver protein
13_1_20cm_3_scaffold_1197_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11841..12665
DNA (825bp) protein (275aa)
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CP58_DESK7
glutamate racemase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_1197_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

12662..13768
DNA (1107bp) protein (369aa)
Ribosome-binding ATPase YchF n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L188_THERP rbh
GTP-dependent nucleic acid-binding protein EngD; K06942 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ychF; GTP-dependent nucleic acid-binding protein EngD
13_1_20cm_3_scaffold_1197_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13768..14664
DNA (897bp) protein (299aa)
PfkB domain protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CC15_THET1
PfkB domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PfkB domain-containing protein
13_1_20cm_3_scaffold_1197_16
unknown

Not on your lists

comp(14604..14870)
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_20cm_3_scaffold_1197_17
unknown

Not on your lists

comp(14867..15145)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_20cm_3_scaffold_1197_18
unknown

Not on your lists

comp(15174..15440)
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_20cm_3_scaffold_1197_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(15469..16209)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Actinomyces timonensis RepID=UPI00030E7D50
family 3 extracellular solute-binding protein; K10005 glutamate transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
family 3 extracellular solute-binding protein
13_1_20cm_3_scaffold_1197_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

16420..17208
DNA (789bp) protein (263aa)
Beta-lactamase (EC:3.5.2.6) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Beta-lactamase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EX10_EMTOG
beta-lactamase
13_1_20cm_3_scaffold_1197_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

17216..17605
DNA (390bp) protein (130aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_1197_22
unknown

Not on your lists

comp(17592..18353)
DNA (762bp) protein (254aa)

This feature has no annotations

13_1_20cm_3_scaffold_1197_trna_1
unknown

Not on your lists

17620..17691
DNA (72bp)
transferRNA
13_1_20cm_3_scaffold_1197_23
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

18370..19287
DNA (918bp) protein (306aa)
PP-loop; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI00036D3B5A
tRNA(Ile)-lysidine synthetase
13_1_20cm_3_scaffold_1197_24
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

19736..20239
DNA (504bp) protein (168aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ECQ2_9CHLR
Displaying 25 items

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