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13_1_20cm_3_scaffold_1217

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1217_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2..358)
DNA (357bp) protein (119aa)
Protein of unknown function DUF2232, membrane
Uncharacterized protein {ECO:0000313|EMBL:AHG90488.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_3_scaffold_1217_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(359..580)
DNA (222bp) protein (74aa)
30S ribosomal protein S18 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N7_GEMAT
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
30S ribosomal protein S18
13_1_20cm_3_scaffold_1217_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(587..949)
DNA (363bp) protein (121aa)
30S ribosomal protein S6 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N8_GEMAT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
30S ribosomal protein S6
13_1_20cm_3_scaffold_1217_4
unknown

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1120..1377
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_20cm_3_scaffold_1217_5
unknown

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1512..1997
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_20cm_3_scaffold_1217_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2114..3013)
DNA (900bp) protein (300aa)
Ribosome-binding ATPase YchF n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7P0_GEMAT
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
GTP-binding protein YchF
13_1_20cm_3_scaffold_1217_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3055..3648)
DNA (594bp) protein (198aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
Peptidyl-tRNA hydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PTH_GEMAT
Peptidyl-tRNA hydrolase
13_1_20cm_3_scaffold_1217_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(3663..4358)
DNA (696bp) protein (232aa)
50S ribosomal protein L25 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Q0_GEMAT
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334}; TaxID=379066 species="Bacteria; Gemmatimonadet
rplY; 50S ribosomal protein L25
13_1_20cm_3_scaffold_1217_9
unknown

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comp(4365..4463)
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_20cm_3_scaffold_1217_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4472..5428)
DNA (957bp) protein (319aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Q1_GEMAT
Ribose-phosphate pyrophosphokinase
13_1_20cm_3_scaffold_1217_trna_1
unknown

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comp(5468..5538)
DNA (71bp)
transferRNA
13_1_20cm_3_scaffold_1217_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5587..6483)
DNA (897bp) protein (299aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S6_GEMAT
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
13_1_20cm_3_scaffold_1217_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6480..7484)
DNA (1005bp) protein (335aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S7_GEMAT
Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD {ECO:0000313|EMBL:AHG90506.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD
13_1_20cm_3_scaffold_1217_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7488..8366)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S8_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH38288.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_1217_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8434..9165)
DNA (732bp) protein (244aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279,
pdxJ; pyridoxine 5'-phosphate synthase (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S9_GEMAT
13_1_20cm_3_scaffold_1217_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9213..9659
DNA (447bp) protein (149aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90509.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_3_scaffold_1217_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9656..10066)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T1_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH38291.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_1217_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10178..10507
DNA (330bp) protein (110aa)
Thioredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T2_GEMAT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 1
trxA; thioredoxin
13_1_20cm_3_scaffold_1217_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10532..11398
DNA (867bp) protein (289aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T3_GEMAT
Ribosomal RNA small subunit methyltransferase I
13_1_20cm_3_scaffold_1217_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11441..12067
DNA (627bp) protein (209aa)
Fumarylacetoacetate hydrolase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T9_GEMAT
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:AHG90520.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
fumarylacetoacetate (FAA) hydrolase
13_1_20cm_3_scaffold_1217_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12067..13305
DNA (1239bp) protein (413aa)
Aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9I6_GEMAT
Aminotransferase class I and II {ECO:0000313|EMBL:AHG91238.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
aminotransferase class I and II
13_1_20cm_3_scaffold_1217_21
unknown

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comp(13172..13432)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_20cm_3_scaffold_1217_22
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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14264..14605
DNA (342bp) protein (114aa)
Transcriptional repressor, CopY family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X41_SOLUE
Transcriptional repressor, CopY family {ECO:0000313|EMBL:ABJ85774.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Sol
CopY family transcriptional regulator
13_1_20cm_3_scaffold_1217_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14608..16827
DNA (2220bp) protein (740aa)
Antirepressor regulating drug resistance protein n=2 Tax=Singulisphaera acidiphila RepID=L0DNH4_SINAD
Peptidase M56 BlaR1 {ECO:0000313|EMBL:AHG88998.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase M56 BlaR1
Displaying 24 items

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