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13_1_20cm_3_scaffold_122

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_122_1
unknown

Not on your lists

comp(1..330)
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_20cm_3_scaffold_122_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(327..1700)
DNA (1374bp) protein (458aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F132_CONWI
lysyl-tRNA synthetase
13_1_20cm_3_scaffold_122_3
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(1697..2320)
DNA (624bp) protein (208aa)
polysaccharide deacetylase n=1 Tax=Streptomyces sp. LaPpAH-108 RepID=UPI0003621E14
glycosyl transferase, family 2 Tax=RBG_16_Elusimicrobia_66_12_curated
polysaccharide deacetylase
13_1_20cm_3_scaffold_122_4
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2435..2908)
DNA (474bp) protein (158aa)
Transcription elongation factor GreA n=1 Tax=Thermincola potens (strain JR) RepID=D5X9P6_THEPJ
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=635013 species="Bacteria
GreA/GreB family elongation factor
13_1_20cm_3_scaffold_122_5
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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3023..4087
DNA (1065bp) protein (355aa)
tRNA-dihydrouridine synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F130_CONWI
dihydrouridine synthase Tax=RBG_13_Actinobacteria_63_9_curated
dihydrouridine synthase
13_1_20cm_3_scaffold_122_6
Brassica oleracea, Brassica, Brassicales, rosids, Streptophyta, Viridiplantae

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comp(4096..4737)
DNA (642bp) protein (214aa)
Extensin-like protein n=2 Tax=Zea mays RepID=Q9SPM0_MAIZE
Uncharacterized protein {ECO:0000313|EnsemblPlants:Bo6g107190.1}; TaxID=109376 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons;
hypothetical protein
13_1_20cm_3_scaffold_122_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4786..5760)
DNA (975bp) protein (325aa)
Diguanylate cyclase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9G7_CONWI
Diguanylate cyclase {ECO:0000313|EMBL:ADB49134.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="C
diguanylate cyclase
13_1_20cm_3_scaffold_122_8
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(5779..6528)
DNA (750bp) protein (250aa)
pantothenate kinase (EC:2.7.1.33); K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=RBG_16_Actinobacteria_67_10_curated
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=COAX_MOOTA
13_1_20cm_3_scaffold_122_9
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(6535..6900)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Citricoccus sp. CH26A RepID=UPI000255F471
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein
13_1_20cm_3_scaffold_122_10
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(6897..7370)
DNA (474bp) protein (158aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] Tax=RBG_16_Actinobacteria_67_10_
7, 8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47B68_DECAR
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
13_1_20cm_3_scaffold_122_11
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7405..8889
DNA (1485bp) protein (495aa)
Thermitase domain protein {ECO:0000313|EMBL:EGW39902.1}; EC=3.4.21.66 {ECO:0000313|EMBL:EGW39902.1};; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfospor
Thermitase domain protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FQW3_9FIRM
putative subtilase-family protease
13_1_20cm_3_scaffold_122_12
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8870..9202)
DNA (333bp) protein (111aa)
Dihydroneopterin aldolase {ECO:0000313|EMBL:CEG99155.1}; EC=4.1.2.25 {ECO:0000313|EMBL:CEG99155.1};; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propioniba
folB; dihydroneopterin aldolase (EC:4.1.2.25)
Dihydroneopterin aldolase n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GG60_PROFC
13_1_20cm_3_scaffold_122_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(9199..9951)
DNA (753bp) protein (251aa)
dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15] Tax=RBG_16_Actinobacteria_67_10_curated
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F125_CONWI
13_1_20cm_3_scaffold_122_14
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

10000..11745
DNA (1746bp) protein (582aa)
Putative ABC transporter permease/ATP-binding protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5APW5_9ACTN
Putative ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:BAN03235.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter
putative ABC transporter permease/ATP-binding protein
13_1_20cm_3_scaffold_122_15
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

11745..13490
DNA (1746bp) protein (582aa)
Putative ABC transporter permease/ATP-binding protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A446_9ACTN
Putative ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:BAN03234.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter
putative ABC transporter permease/ATP-binding protein
13_1_20cm_3_scaffold_122_16
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13698..14063)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037C0DB0
Membrane protein {ECO:0000313|EMBL:KJK34658.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia a
hypothetical protein
13_1_20cm_3_scaffold_122_17
Corynebacterium imitans, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14140..14424)
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VST2_9CORY
Uncharacterized protein {ECO:0000313|EMBL:AIJ34161.1}; TaxID=156978 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium imitans.;"
hypothetical protein
13_1_20cm_3_scaffold_122_18
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14421..16508)
DNA (2088bp) protein (696aa)
carbonate dehydratase n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037D6799 rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EOD66693.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis va
heavy metal translocating P-type ATPase
13_1_20cm_3_scaffold_122_19
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(16505..16708)
DNA (204bp) protein (68aa)
copper chaperone n=1 Tax=Nocardiopsis alkaliphila RepID=UPI00034951E3
Transporter {ECO:0000313|EMBL:KFF97545.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
metal binding protein
13_1_20cm_3_scaffold_122_20
unknown

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16796..16972
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_20cm_3_scaffold_122_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(16982..18457)
DNA (1476bp) protein (492aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RBG_16_Actinobacteria_68_12_curated
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Patulibacter medicamentivorans RepID=H0E4E5_9ACTN
Displaying 21 items

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