ggKbase home page

13_1_20cm_3_scaffold_1260

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1260_1
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..888)
DNA (888bp) protein (296aa)
ERCC4 domain protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BV19_NITHN
ERCC4 domain-containing protein Tax=CG_Delta_01
ERCC4 domain-containing protein
13_1_20cm_3_scaffold_1260_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

996..1280
DNA (285bp) protein (95aa)
Insertion element protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4V0_9CHLR
Insertion element protein {ECO:0000313|EMBL:EFH81530.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter rac
ISSru3, transposase insA
13_1_20cm_3_scaffold_1260_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

1367..1750
DNA (384bp) protein (128aa)
Integrase family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0I6_9CHLR
Integrase family protein {ECO:0000313|EMBL:EFH82326.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter race
putative site-specific recombinase
13_1_20cm_3_scaffold_1260_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

1846..6357
DNA (4512bp) protein (1504aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TGZ7_9CHLR rbh
Uncharacterized protein {ECO:0000313|EMBL:EFH88926.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
regulatory protein DeoR
13_1_20cm_3_scaffold_1260_5
unknown

Not on your lists

6354..7034
DNA (681bp) protein (227aa)

This feature has no annotations

13_1_20cm_3_scaffold_1260_6
unknown

Not on your lists

7031..8626
DNA (1596bp) protein (532aa)

This feature has no annotations

13_1_20cm_3_scaffold_1260_7
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8877..9593
DNA (717bp) protein (239aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=N9VSH7_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:ENY74498.1}; TaxID=1227924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putid
hypothetical protein
13_1_20cm_3_scaffold_1260_8
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9662..10015
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei Pasteur 52237 RepID=A8KF73_BURPE
hypothetical protein
Tax=BJP_08E140C01_Dechloromonas_61_78
13_1_20cm_3_scaffold_1260_9
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

10065..15503
DNA (5439bp) protein (1813aa)
Helicase superfamily 1 and 2 ATP-binding n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B5T9_HERA2 rbh
Strain A contig00100, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ53570.1}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiotherm
helicase superfamily protein
13_1_20cm_3_scaffold_1260_10
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

15500..16684
DNA (1185bp) protein (395aa)
Strain A contig00100, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ53569.1}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiotherm
13_1_20cm_3_scaffold_1260_11
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17347..17589)
DNA (243bp) protein (81aa)
Monooxygenase, FAD-binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWH9_RUBXD
Uncharacterized protein {ECO:0000313|EMBL:ETK37639.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
monooxygenase
13_1_20cm_3_scaffold_1260_12
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17596..18006)
DNA (411bp) protein (137aa)
Monooxygenase, FAD-binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWH9_RUBXD
Monooxygenase, FAD-binding protein {ECO:0000313|EMBL:ABG04249.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" sou
monooxygenase
13_1_20cm_3_scaffold_1260_13
unknown

Not on your lists

18366..18578
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_20cm_3_scaffold_1260_14
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18578..19978
DNA (1401bp) protein (467aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM06_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:AIK96604.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibact
hypothetical protein
13_1_20cm_3_scaffold_1260_15
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(20084..20977)
DNA (894bp) protein (298aa)
Integrase domain protein SAM domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TCN6_9CHLR
Integrase domain protein SAM domain protein {ECO:0000313|EMBL:EFH88150.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source=
integrase family protein
13_1_20cm_3_scaffold_1260_16
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

21272..22264
DNA (993bp) protein (331aa)
WD repeat protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WPS4_METH6
WD repeat protein
Tax=BJP_IG2158_Zixibacteria_48_33
13_1_20cm_3_scaffold_1260_17
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

22425..24308
DNA (1884bp) protein (628aa)
TPR repeat-containing protein n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9F143_9CYAN
hypothetical protein
Tax=BJP_IG2158_Zixibacteria_48_33
13_1_20cm_3_scaffold_1260_18
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(24285..24989)
DNA (705bp) protein (235aa)
Rhodopirellula transposase family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U8C8_9CHLR
Rhodopirellula transposase family protein {ECO:0000313|EMBL:EFH80139.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedono
hypothetical protein
13_1_20cm_3_scaffold_1260_19
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(24986..25267)
DNA (282bp) protein (94aa)
Rhodopirellula transposase family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U7A0_9CHLR
Rhodopirellula transposase family protein {ECO:0000313|EMBL:EFH79761.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="K
Rhodopirellula transposase
Displaying 19 items

View Taxonomy