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13_1_20cm_3_scaffold_1296

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1296_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..669)
DNA (669bp) protein (223aa)
Glycoside hydrolase 15-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IVS7_POLGS
glycoside hydrolase 15-related protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
glycoside hydrolase 15-like protein
13_1_20cm_3_scaffold_1296_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

793..3312
DNA (2520bp) protein (840aa)
Putative lipoprotein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIU7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHG93807.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_1296_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

3565..4536
DNA (972bp) protein (324aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UAU9_FERPD
carbohydrate ABC transporter substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
carbohydrate ABC transporter substrate-binding protein
13_1_20cm_3_scaffold_1296_4

Not on your lists

4966..5415
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Caldibacillus debilis RepID=UPI00035DE735
ABC transporter permease {ECO:0000313|EMBL:AHN97880.1}; TaxID=1447237 species="Bacteria; environmental samples.;" source="uncultured bacterium lac127.;"
ABC transporter permease
13_1_20cm_3_scaffold_1296_5

Not on your lists

5412..6236
DNA (825bp) protein (275aa)
Maltose transport system permease protein MalG n=2 Tax=Thermosipho africanus RepID=B7IGU3_THEAB
Maltose transporter permease {ECO:0000313|EMBL:AHN97881.1}; TaxID=1447237 species="Bacteria; environmental samples.;" source="uncultured bacterium lac127.;"
maltose transporter permease MalG
13_1_20cm_3_scaffold_1296_6
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6474..7565
DNA (1092bp) protein (364aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJ69_THEM7
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC {ECO:0000313|EMBL:AKF11426.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaraci
sugar ABC transporter ATP-binding protein
13_1_20cm_3_scaffold_1296_7
unknown

Not on your lists

comp(7562..7972)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_20cm_3_scaffold_1296_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8039..9811)
DNA (1773bp) protein (591aa)
Peptidoglycan binding domain protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2FWU9_9GAMM
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AHG89531.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ErfK/YbiS/YcfS/YnhG family protein
13_1_20cm_3_scaffold_1296_9
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(9886..11259)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2M9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIE86465.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
hypothetical protein
13_1_20cm_3_scaffold_1296_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11280..13031)
DNA (1752bp) protein (584aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7P1_GEMAT rbh
Peptidase M28 {ECO:0000313|EMBL:AHG91923.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase M28
13_1_20cm_3_scaffold_1296_11
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13108..13497)
DNA (390bp) protein (130aa)
DinB family protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KNS0_SOLCM
DinB family protein {ECO:0000313|EMBL:AFD05177.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (
DinB family protein
13_1_20cm_3_scaffold_1296_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13562..13951)
DNA (390bp) protein (130aa)
Regulatory protein MarR n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V3A9_TERSS
Regulatory protein MarR {ECO:0000313|EMBL:AHG92523.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
regulatory protein MarR
13_1_20cm_3_scaffold_1296_13
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(14013..14411)
DNA (399bp) protein (133aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRC7_OPITP
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACB74614.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terr
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_3_scaffold_1296_14
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(14472..17192)
DNA (2721bp) protein (907aa)
type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
Response regulator receiver protein id=1943209 bin=GWB2_Elusimicrobium_63_22 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
type II secretion system protein E (GspE)
13_1_20cm_3_scaffold_1296_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17401..18132
DNA (732bp) protein (244aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U7W7_9CYAN
CRP/FNR family transcriptional regulator {ECO:0000313|EMBL:AHG89488.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
CRP/FNR family transcriptional regulator
13_1_20cm_3_scaffold_1296_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18185..19405
DNA (1221bp) protein (407aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC34_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG93701.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function UPF0118
13_1_20cm_3_scaffold_1296_17
unknown

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19581..20114
DNA (534bp) protein (178aa)

This feature has no annotations

13_1_20cm_3_scaffold_1296_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20338..21114
DNA (777bp) protein (259aa)
Putative TonB protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A976_GEMAT
TonB family protein {ECO:0000313|EMBL:AHG91155.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
TonB family protein
13_1_20cm_3_scaffold_1296_19
unknown

Not on your lists

21382..21531
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying 19 items

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