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13_1_20cm_3_scaffold_1345

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1345_1
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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3..1004
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXZ3_ROSS1
Uncharacterized protein {ECO:0000313|EMBL:ABQ91496.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp.
hypothetical protein
13_1_20cm_3_scaffold_1345_2
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1565..3448
DNA (1884bp) protein (628aa)
Fis family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDE0F rbh
Fis family transcriptional regulator {ECO:0000313|EMBL:CQD23916.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentifla
Fis family transcriptional regulator
13_1_20cm_3_scaffold_1345_3
unknown

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comp(3833..4054)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_20cm_3_scaffold_1345_4
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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4105..4506
DNA (402bp) protein (134aa)
CoA-binding domain protein n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9SYU4_MICAI
CoA-binding domain protein {ECO:0000313|EMBL:ADL45129.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (st
CoA-binding domain-containing protein
13_1_20cm_3_scaffold_1345_5
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

4563..4928
DNA (366bp) protein (122aa)
Transcriptional regulator, AsnC family n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TQC4_DESML
transcriptional regulator Tax=RBG_16_Spirochaete_67_19_curated
ParB domain-containing protein nuclease
13_1_20cm_3_scaffold_1345_6
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

5168..5617
DNA (450bp) protein (150aa)
mgsA; methylglyoxal synthase (EC:4.2.3.3); K01734 methylglyoxal synthase [EC:4.2.3.3] Tax=RBG_16_Chloroflexi_64_43_curated
Methylglyoxal synthase id=4607606 bin=GWC2_Deltaproteobacteria_66_88 species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
methylglyoxal synthase
13_1_20cm_3_scaffold_1345_7

Not on your lists

comp(6201..6788)
DNA (588bp) protein (196aa)
Marine sediment metagenome DNA, contig: S12H4_C05862 {ECO:0000313|EMBL:GAI84001.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_20cm_3_scaffold_1345_8
unknown

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comp(7669..8064)
DNA (396bp) protein (132aa)

This feature has no annotations

13_1_20cm_3_scaffold_1345_9
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(8292..8810)
DNA (519bp) protein (173aa)
Single-stranded DNA-binding protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEN2_CHLTF
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=981222 species="Bacteria; Acidobacteria; Acido
ssDNA-binding protein
13_1_20cm_3_scaffold_1345_10
unknown

Not on your lists

9069..9317
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_20cm_3_scaffold_1345_11
unknown

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comp(9288..11069)
DNA (1782bp) protein (594aa)

This feature has no annotations

13_1_20cm_3_scaffold_1345_12
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(11073..13730)
DNA (2658bp) protein (886aa)
Putative ATPase-like protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EM25_9CHLR
Putative ATPase-like protein {ECO:0000313|EMBL:CCF85738.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" s
TraG/VirD4-like conjugation protein involved in type IV secretion
13_1_20cm_3_scaffold_1345_13
unknown

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13756..13977
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_20cm_3_scaffold_1345_14
CG_CPR16-01, CG_CPR16, Bacteria

Not on your lists

comp(13950..15815)
DNA (1866bp) protein (622aa)
Type IV secretory pathway VirB4 components-like n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2JCC3_FRASC
Type IV secretory pathway VirB4 components-like protein Tax=CG_CPR16-01
Type IV secretory pathway VirB4 components-like protein
13_1_20cm_3_scaffold_1345_15
unknown

Not on your lists

comp(16034..16864)
DNA (831bp) protein (277aa)

This feature has no annotations

13_1_20cm_3_scaffold_1345_16
unknown

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comp(16880..17239)
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_20cm_3_scaffold_1345_17
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(17347..18675)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EM30_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF85743.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
13_1_20cm_3_scaffold_1345_18
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18799..19161)
DNA (363bp) protein (121aa)
Tfp pilus assembly protein PilF n=1 Tax=Moorea producens 3L RepID=F4XLH4_9CYAN
Tfp pilus assembly protein PilF {ECO:0000313|EMBL:EGJ34586.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
Displaying 18 items

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