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13_1_20cm_3_scaffold_1347

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1347_1
Thermus aquaticus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(32..526)
DNA (495bp) protein (165aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A6L6_THEAQ
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
phosphoribosylaminoimidazole carboxylase catalytic subunit PurE
13_1_20cm_3_scaffold_1347_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(560..1417)
DNA (858bp) protein (286aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAT1_GEMAT
13_1_20cm_3_scaffold_1347_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1448..1852)
DNA (405bp) protein (135aa)
50S ribosomal protein L19 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAT2_GEMAT
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
50S ribosomal protein L19
13_1_20cm_3_scaffold_1347_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1963..2682)
DNA (720bp) protein (240aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAW8_GEMAT
tRNA (guanine-N(1)-)-methyltransferase
13_1_20cm_3_scaffold_1347_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2633..3232)
DNA (600bp) protein (200aa)
Ribosome maturation factor RimM n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAW9_GEMAT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;"
Ribosome maturation factor rimM
13_1_20cm_3_scaffold_1347_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3199..3513)
DNA (315bp) protein (105aa)
30S ribosomal protein S16 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS16_GEMAT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
30S ribosomal protein S16
13_1_20cm_3_scaffold_1347_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(3723..4397)
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INJ2_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF41558.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
hypothetical protein
13_1_20cm_3_scaffold_1347_8
unknown

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comp(4487..5146)
DNA (660bp) protein (220aa)

This feature has no annotations

13_1_20cm_3_scaffold_1347_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5302..5973)
DNA (672bp) protein (224aa)
Signal recognition particle protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY3_GEMAT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmati
ffh; signal recognition particle protein
13_1_20cm_3_scaffold_1347_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6595..9081
DNA (2487bp) protein (829aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
Lon protease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY4_GEMAT
ATP-dependent protease La
13_1_20cm_3_scaffold_1347_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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9125..9529
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) RepID=A7HJ22_FERNB
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_3_scaffold_1347_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9507..10016
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Paenisporosarcina sp. HGH0030 RepID=S2XLA1_9BACL
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_3_scaffold_1347_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10020..11246)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY6_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH39392.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_1347_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11328..12182)
DNA (855bp) protein (285aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=379066
pilD; leader peptidase/N-methyltransferase (EC:2.1.1.- 3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY7_GEMAT
13_1_20cm_3_scaffold_1347_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12179..12937)
DNA (759bp) protein (253aa)
Putative RNA methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY8_GEMAT
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:AHG91370.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
tRNA/rRNA methyltransferase (SpoU)
13_1_20cm_3_scaffold_1347_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13013..13819
DNA (807bp) protein (269aa)
Peptidase M48 family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY9_GEMAT
Peptidase M48 Ste24p {ECO:0000313|EMBL:AHG91371.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase M48 Ste24p
13_1_20cm_3_scaffold_1347_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

13908..14609
DNA (702bp) protein (234aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIT4_RHOMR
phosphomethylpyrimidine kinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_3_scaffold_1347_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14588..15436)
DNA (849bp) protein (283aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=861299 species="Bac
Purine nucleoside phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ0_GEMAT
inosine guanosine and xanthosine phosphorylase family
13_1_20cm_3_scaffold_1347_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15433..16479)
DNA (1047bp) protein (349aa)
Adenosine deaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ1_GEMAT
Adenosine deaminase {ECO:0000313|EMBL:AHG91373.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
adenosine deaminase
13_1_20cm_3_scaffold_1347_20
unknown

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comp(16479..16727)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_20cm_3_scaffold_1347_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16724..17839)
DNA (1116bp) protein (372aa)
2',3'-cyclic-nucleotide 2'-phosphodiesterase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ3_GEMAT
5'-Nucleotidase domain-containing protein {ECO:0000313|EMBL:AHG91375.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
5'-Nucleotidase domain-containing protein
13_1_20cm_3_scaffold_1347_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18444..19160
DNA (717bp) protein (239aa)
Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ5_GEMAT
Phosphate regulon transcriptional regulatory protein PhoB {ECO:0000313|EMBL:BAH39401.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="
phoB; phosphate regulon transcriptional regulatory protein PhoB
13_1_20cm_3_scaffold_1347_23
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19157..20173
DNA (1017bp) protein (339aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" s
Phosphate regulon sensor protein PhoR n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ6_GEMAT
phoR; phosphate regulon sensor protein PhoR
Displaying 23 items

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