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13_1_20cm_3_scaffold_1402

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1402_1
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..2037
DNA (2037bp) protein (679aa)
Glycoside hydrolase family 65 central catalytic n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VPH6_CAUST
Glycoside hydrolase family 65 central catalytic {ECO:0000313|EMBL:ADG12399.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" so
glycosyl hydrolase family protein
13_1_20cm_3_scaffold_1402_2
unknown

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2132..2263
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_20cm_3_scaffold_1402_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2362..2994)
DNA (633bp) protein (211aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_1402_4
Gordonia paraffinivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3016..3399
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037FCA43
Uncharacterized protein {ECO:0000313|EMBL:GAC85297.1}; TaxID=1223543 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
endoribonuclease L-PSP
13_1_20cm_3_scaffold_1402_5
unknown

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3429..4520
DNA (1092bp) protein (364aa)

This feature has no annotations

13_1_20cm_3_scaffold_1402_6
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4620..6533)
DNA (1914bp) protein (638aa)
Peroxinectin {ECO:0000313|EMBL:CEL20263.1}; EC=1.11.1.7 {ECO:0000313|EMBL:CEL20263.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" sour
peroxidase (EC:1.11.1.7)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI0003682B2F
13_1_20cm_3_scaffold_1402_trna_1
unknown

Not on your lists

7189..7260
DNA (72bp)
transferRNA
13_1_20cm_3_scaffold_1402_7
Bacillus cellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7265..9214)
DNA (1950bp) protein (650aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=649639 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" sour
Dihydrolipoyl dehydrogenase n=1 Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6TUN0_BACCJ
dihydrolipoamide dehydrogenase
13_1_20cm_3_scaffold_1402_8
unknown

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comp(9214..9513)
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_20cm_3_scaffold_1402_9
Nonlabens ulvanivorans, Nonlabens, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9678..9860)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Nonlabens dokdonensis (strain DSM 17205 / KCTC 12402 / DSW-6) RepID=L7WHK9_NONDD
Protein yjbJ {ECO:0000313|EMBL:GAK77522.1}; TaxID=906888 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Nonlabens.;" source="Nonlabens ulvanivorans.;"
hypothetical protein
13_1_20cm_3_scaffold_1402_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10402..11352)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XY92_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AGP37439.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
hypothetical protein
13_1_20cm_3_scaffold_1402_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(12155..14119)
DNA (1965bp) protein (655aa)
acetate/CoA ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Acetyl-coenzyme A synthetase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFU2_THET1 rbh
acetate/CoA ligase
13_1_20cm_3_scaffold_1402_12
unknown

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comp(14132..14617)
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_20cm_3_scaffold_1402_13
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

14708..14998
DNA (291bp) protein (97aa)
HU-beta DNA-binding protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGB0_IGNAJ
HU-beta DNA-binding protein {ECO:0000313|EMBL:AFH48017.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibact
hupB; HU-beta DNA-binding protein
13_1_20cm_3_scaffold_1402_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

15260..16087
DNA (828bp) protein (276aa)
ligC; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ATP dependent DNA ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL20_KORVE
ligC; ATP-dependent DNA ligase
13_1_20cm_3_scaffold_1402_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(16233..17243)
DNA (1011bp) protein (337aa)
eukaryotic-type DNA primase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
DNA primase small subunit id=14629245 bin=bin8_Chloro species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
DNA primase small subunit
13_1_20cm_3_scaffold_1402_16
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17264..18895)
DNA (1632bp) protein (544aa)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)) {ECO:0000313|EMBL:EDZ99138.1}; EC=1.1.1.40 {ECO:0000313|EMBL:EDZ99138.1};; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacte
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)) n=1 Tax=Burkholderia sp. H160 RepID=B5WR37_9BURK rbh
malic protein NAD-binding protein
13_1_20cm_3_scaffold_1402_17
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

18910..19644
DNA (735bp) protein (245aa)
hypothetical protein Tax=GWA2_Bdellovibrionales_49_15_curated
Putative uncharacterized protein id=5008880 bin=GWA2__Bacteriovorax-rel_49_15 species=Leeuwenhoekiella blandensis genus=Leeuwenhoekiella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
hypothetical protein
13_1_20cm_3_scaffold_1402_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(19617..20645)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000309FD5E
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_3_scaffold_1402_19
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(20704..22056)
DNA (1353bp) protein (451aa)
integral membrane sensor signal transduction histidine kinase; K07653 two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] Tax=RBG_16_Actinobacteria_67_10_curated
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2PGB6_STRVO
integral membrane sensor signal transduction histidine kinase
13_1_20cm_3_scaffold_1402_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(22053..22730)
DNA (678bp) protein (226aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F016_CONWI
putative two-component system response regulator; K07669 two-component system, OmpR family, response regulator MprA Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Response regulator mprA
13_1_20cm_3_scaffold_1402_21
Streptomyces sp. FR1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22869..23465
DNA (597bp) protein (199aa)
UPI0003D84034 related cluster n=1 Tax=unknown RepID=UPI0003D84034
Uncharacterized protein {ECO:0000313|EMBL:AHE38873.1}; TaxID=349971 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. FR1.;"
Displaying 22 items

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