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13_1_20cm_3_scaffold_1537

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1537_1
Populus trichocarpa, Populus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

2..529
DNA (528bp) protein (176aa)
UPI0003D7832F related cluster n=1 Tax=unknown RepID=UPI0003D7832F
Uncharacterized protein {ECO:0000313|EMBL:EEF03196.2}; TaxID=3694 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
uncharacterized LOC100638451
13_1_20cm_3_scaffold_1537_2
unknown

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539..865
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_20cm_3_scaffold_1537_3
unknown

Not on your lists

1341..2660
DNA (1320bp) protein (440aa)

This feature has no annotations

13_1_20cm_3_scaffold_1537_4
unknown

Not on your lists

2727..3347
DNA (621bp) protein (207aa)

This feature has no annotations

13_1_20cm_3_scaffold_1537_5
unknown

Not on your lists

comp(3369..4004)
DNA (636bp) protein (212aa)

This feature has no annotations

13_1_20cm_3_scaffold_1537_6
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

4215..6215
DNA (2001bp) protein (667aa)
1A family penicillin-binding protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Penicillin-binding protein, 1A family id=2979994 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
glycosyl transferase family protein
13_1_20cm_3_scaffold_1537_7
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

6226..7776
DNA (1551bp) protein (517aa)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000313|EMBL:ACZ39385.1}; EC=2.4.1.15 {ECO:0000313|EMBL:ACZ39385.1};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaer
alpha,alpha-trehalose-phosphate synthase (UDP-forming) (EC:2.4.1.15)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C568_SPHTD
13_1_20cm_3_scaffold_1537_8
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8097..8495
DNA (399bp) protein (133aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; N
Trehalose 6-phosphatase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNV1_NOCSJ
HAD family hydrolase
13_1_20cm_3_scaffold_1537_9
unknown

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comp(8544..9164)
DNA (621bp) protein (207aa)

This feature has no annotations

13_1_20cm_3_scaffold_1537_10
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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comp(9302..9793)
DNA (492bp) protein (164aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein id=1245896 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
13_1_20cm_3_scaffold_1537_11
Bacillus nealsonii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9885..11900)
DNA (2016bp) protein (672aa)
Uncharacterized protein n=1 Tax=Bacillus alcalophilus ATCC 27647 RepID=J8TTG4_BACAO
Uncharacterized protein {ECO:0000313|EMBL:EOR22914.1}; TaxID=1202533 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus nealsonii AAU1.;"
13_1_20cm_3_scaffold_1537_12
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12019..13317)
DNA (1299bp) protein (433aa)
Marine sediment metagenome DNA, contig: S12H4_S00688 Tax=RBG_16_Deltaproteobacteria_71_12_curated
13_1_20cm_3_scaffold_1537_13
unknown

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13701..14552
DNA (852bp) protein (284aa)

This feature has no annotations

13_1_20cm_3_scaffold_1537_14
R_SM2F11_46_24, SM2F11, Bacteria

Not on your lists

14509..16494
DNA (1986bp) protein (662aa)
Penicillin-binding protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2S6_ANATU
putative penicillin-binding protein Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_24_curated
penicillin-binding protein
13_1_20cm_3_scaffold_1537_15
Hyphomonas hirschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16754..17374)
DNA (621bp) protein (207aa)
RNA polymerase sigma factor n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C2K7_HYPNA
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1280951 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas hi
ECF subfamily RNA polymerase sigma factor
13_1_20cm_3_scaffold_1537_16
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17579..19123
DNA (1545bp) protein (515aa)
Diguanylate cyclase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JB86_ANAD2
Diguanylate cyclase {ECO:0000313|EMBL:ACL65713.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" sourc
diguanylate cyclase
13_1_20cm_3_scaffold_1537_17
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19120..19599)
DNA (480bp) protein (160aa)
LuxR family DNA-binding response regulator n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WBS1_9ACTO
LuxR family DNA-binding response regulator {ECO:0000313|EMBL:EFL25027.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hima
two component LuxR family transcriptional regulator
13_1_20cm_3_scaffold_1537_18
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19697..20953)
DNA (1257bp) protein (419aa)
Putative signal transduction histidine kinase n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P1R2_STRVO
Aromatic ring-opening dioxygenase LigA {ECO:0000313|EMBL:EXU65873.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh
signal transduction histidine kinase
13_1_20cm_3_scaffold_1537_19
unknown

Not on your lists

21121..21381
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_20cm_3_scaffold_1537_20
Mycobacterium gastri, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21476..22390)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI000361735A
Patatin {ECO:0000313|EMBL:ETW21677.1}; TaxID=1436723 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gastri 'Wayne'.;"
alpha/beta hydrolase
13_1_20cm_3_scaffold_1537_21
unknown

Not on your lists

22728..22958
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_3_scaffold_1537_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(23026..24276)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003656273
paaK; phenylacetate-CoA ligase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
paaK; phenylacetate-CoA ligase
13_1_20cm_3_scaffold_1537_23
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(24248..24973)
DNA (726bp) protein (242aa)
aminotransferase (EC:2.6.1.-); K15372 taurine---2-oxoglutarate transaminase [EC:2.6.1.55] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
aminotransferase (EC:2.6.1.-)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00035F8979
13_1_20cm_3_scaffold_1537_24
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(25596..26585)
DNA (990bp) protein (330aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=14629589 bin=bin8_Chloro species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
13_1_20cm_3_scaffold_1537_25
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(26560..27213)
DNA (654bp) protein (218aa)
Transcriptional regulator, MerR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TRD3_9CHLR id=1247688 bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
excisionase family DNA binding domain-containing protein Tax=RBG_16_Chloroflexi_63_12_curated
hypothetical protein
13_1_20cm_3_scaffold_1537_26
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(27275..27661)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5H4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH81754.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
Displaying 26 items

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