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13_1_20cm_3_scaffold_1543

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1543_1
unknown

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3..185
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_20cm_3_scaffold_1543_2
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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182..814
DNA (633bp) protein (211aa)
Glutathione S-transferase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MSX2_CORCM
Glutathione S-transferase {ECO:0000313|EMBL:AFE09009.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="C
gstA3; glutathione S-transferase
13_1_20cm_3_scaffold_1543_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(811..2139)
DNA (1329bp) protein (443aa)
Adenylyl cyclase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EV18_MODMB
adenylyl cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
adenylyl cyclase
13_1_20cm_3_scaffold_1543_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2136..2849)
DNA (714bp) protein (238aa)
metallophosphoesterase; K09769 hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
Metallophosphoesterase id=3938016 bin=GWA2_OP3_53_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
ymdB; putative protein ymdB
13_1_20cm_3_scaffold_1543_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(2897..3763)
DNA (867bp) protein (289aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_3_scaffold_1543_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3833..5023
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036EFDC3
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_3_scaffold_1543_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5039..5980
DNA (942bp) protein (314aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterale
porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3V7_CONWI
13_1_20cm_3_scaffold_1543_8
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

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6052..6321
DNA (270bp) protein (90aa)
hemL; glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=RBG_16_Planctomycetes_64_12_curated
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3W6_CALAS
hemL; glutamate-1-semialdehyde 2,1-aminomutase
13_1_20cm_3_scaffold_1543_9
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6414..7163
DNA (750bp) protein (250aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LNR3_HALO1
glutamate-1-semialdehyde-2,1-aminomutase
13_1_20cm_3_scaffold_1543_10
unknown

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7649..7777
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_20cm_3_scaffold_1543_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

7829..9337
DNA (1509bp) protein (503aa)
4-hydroxybenzoate decarboxylase; K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-] Tax=RBG_16_Actinobacteria_68_12_curated
UbiD family decarboxylase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CY62_HALOH
UbiD family decarboxylase
13_1_20cm_3_scaffold_1543_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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9372..10334
DNA (963bp) protein (321aa)
(2Fe-2S)-binding protein n=1 Tax=Patulibacter americanus RepID=UPI0003B5979D
Rieske (2Fe-2S) iron-sulfur domain-containing protein Tax=RBG_16_Actinobacteria_68_12_curated
Rieske (2Fe-2S) iron-sulfur domain-containing protein
13_1_20cm_3_scaffold_1543_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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10331..11158
DNA (828bp) protein (276aa)
Cytochrome b/b6 domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3V2_CONWI
cytochrome b/b6 domain protein Tax=RBG_16_Actinobacteria_68_12_curated
cytochrome b/b6 domain protein
13_1_20cm_3_scaffold_1543_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11158..11988
DNA (831bp) protein (277aa)
Cytochrome b subunit of the bc complex-like protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3V1_CONWI
cytochrome b subunit of the bc complex-like protein; K03888 menaquinol-cytochrome c reductase cytochrome b/c subunit Tax=RBG_16_Actinobacteria_68_12_curated
cytochrome b subunit of the bc complex-like protein
13_1_20cm_3_scaffold_1543_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11996..12586
DNA (591bp) protein (197aa)
ubiD; aromatic acid decarboxylase (EC:4.1.1.-)
aromatic acid decarboxylase n=1 Tax=Salinimonas chungwhensis RepID=UPI0003707212
3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_3_scaffold_1543_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12583..13275
DNA (693bp) protein (231aa)
ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RBG_16_Actinobacteria_68_12_curated
Demethylmenaquinone methyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3V0_CONWI
ubiquinone/menaquinone biosynthesis methyltransferase
13_1_20cm_3_scaffold_1543_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13272..14177
DNA (906bp) protein (302aa)
trans-hexaprenyltranstransferase (EC:2.5.1.30) Tax=RBG_16_Actinobacteria_68_12_curated
trans-hexaprenyltranstransferase (EC:2.5.1.30)
Trans-hexaprenyltranstransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3U9_CONWI
13_1_20cm_3_scaffold_1543_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14295..15197
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4DE01
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_3_scaffold_1543_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

15191..15952
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67R89_SYMTH
hypothetical protein; K07081 Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_3_scaffold_1543_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

15949..17037
DNA (1089bp) protein (363aa)
Radical SAM domain protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QUZ6_ACEAZ rbh
menaquinone biosynthesis protein Tax=RBG_16_Actinobacteria_68_12_curated
radical SAM domain protein
13_1_20cm_3_scaffold_1543_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

17070..18449
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium JGI 0000001-D5 RepID=UPI0003771145
copper amine oxidase-like domain-containing protein Tax=RBG_16_Actinobacteria_68_12_curated
copper amine oxidase domain-containing protein
13_1_20cm_3_scaffold_1543_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

18459..19109
DNA (651bp) protein (217aa)
SNARE associated golgi family protein n=1 Tax=Frankia sp. CN3 RepID=G6HDN0_9ACTO
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_3_scaffold_1543_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

19087..20169
DNA (1083bp) protein (361aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50) Tax=RBG_16_Actinobacteria_68_12_curated
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Pleiotropic regulatory protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E9G3_9ACTN
13_1_20cm_3_scaffold_1543_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

20169..22043
DNA (1875bp) protein (625aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F439_CONWI
polysaccharide biosynthesis protein CapD Tax=RBG_16_Actinobacteria_68_12_curated
polysaccharide biosynthesis protein CapD
13_1_20cm_3_scaffold_1543_25
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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22363..24012
DNA (1650bp) protein (550aa)
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
UvrD/REP helicase id=4246203 bin=GWC2_Methylomirabilis_70_16 species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
UvrD/REP helicase
13_1_20cm_3_scaffold_1543_26

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24111..25079
DNA (969bp) protein (323aa)
Transposase n=1 Tax=Streptomyces coelicoflavus ZG0656 RepID=H1Q677_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KKK75878.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase
Displaying 26 items

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