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13_1_20cm_3_scaffold_157

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_157_1
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(1..948)
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Verticillium dahliae (strain VdLs.17 / ATCC MYA-4575 / FGSC 10137) RepID=G2WS91_VERDV
hypothetical protein Tax=RBG_16_Chloroflexi_57_11_curated
hypothetical protein
13_1_20cm_3_scaffold_157_2
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(1183..2406)
DNA (1224bp) protein (408aa)
3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC:1.1.1.34); K00021 hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] Tax=CSP1_3_Armatimonadetes
3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC:1.1.1.34); K00021 hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] id=14631451 bin=bin9_gal15 species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC:1.1.1.34)
13_1_20cm_3_scaffold_157_3
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

2418..3230
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UF75_9RHOB
Aminobenzoate oxygenase {ECO:0000313|EMBL:KIF24812.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
13_1_20cm_3_scaffold_157_4
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3250..4089
DNA (840bp) protein (280aa)
Bifunctional protein FolD n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W477_9CLOT
5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase Tax=BJP_IG2102_Methanoregula_52_95
5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase
13_1_20cm_3_scaffold_157_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

4166..4366
DNA (201bp) protein (67aa)
Cold-shock DNA-binding domain protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q9Z1_CATAD
cspA; Cold shock protein, DNA binding Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
cold-shock DNA-binding domain-containing protein
13_1_20cm_3_scaffold_157_6
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4455..4751
DNA (297bp) protein (99aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q3L1_STANL
glutamyl-tRNA(gln) amidotransferase subunit C
13_1_20cm_3_scaffold_157_7

Not on your lists

4748..6151
DNA (1404bp) protein (468aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0E3_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKM63212.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_3_scaffold_157_8
unknown

Not on your lists

6148..6402
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_20cm_3_scaffold_157_9
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

6395..7798
DNA (1404bp) protein (468aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RBG_16_Actinobacteria_64_13_cura
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0E2_CONWI
glutamyl-tRNA(Gln) amidotransferase subunit B
13_1_20cm_3_scaffold_157_10
Mycobacterium farcinogenes, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7864..8475
DNA (612bp) protein (204aa)
Secreted protein n=1 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QU82_MYCS2
Uncharacterized protein {ECO:0000313|EMBL:CDP84134.1}; TaxID=1802 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium farcinogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_157_11
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(8554..8979)
DNA (426bp) protein (142aa)
F420-dependent enzyme Tax=RBG_16_Chloroflexi_57_11_curated
F420-dependent enzyme id=1244726 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
F420-dependent enzyme
13_1_20cm_3_scaffold_157_12
RHI_Saccharibacteria_49_19, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(8987..9571)
DNA (585bp) protein (195aa)
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_49_19_curated
13_1_20cm_3_scaffold_157_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9743..10897
DNA (1155bp) protein (385aa)
Soluble hydrogenase, 42 kDa subunit n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3A8Q3_CARHZ
phosphoserine aminotransferase/L-aspartate aminotransferase Tax=RBG_16_Actinobacteria_68_12_curated
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
13_1_20cm_3_scaffold_157_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10894..12465
DNA (1572bp) protein (524aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0B9_CONWI
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ADB51979.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conex
D-3-phosphoglycerate dehydrogenase
13_1_20cm_3_scaffold_157_15
unknown

Not on your lists

12465..12866
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_20cm_3_scaffold_157_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13124..14059
DNA (936bp) protein (312aa)
ilvE; branched-chain-amino-acid aminotransferase (EC:2.6.1.42) Tax=RBG_16_Actinobacteria_68_12_curated
ilvE; branched-chain-amino-acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid aminotransferase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZZE5_9ACTN
13_1_20cm_3_scaffold_157_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14056..15186
DNA (1131bp) protein (377aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QTA2_ACEAZ
polysaccharide biosynthesis protein Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_3_scaffold_157_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15188..15526
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI00035CA418
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:EDY17528.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cupin
13_1_20cm_3_scaffold_157_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

15555..15893
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XHX0_NAKMY
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_3_scaffold_157_20
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15890..17170
DNA (1281bp) protein (427aa)
Major facilitator superfamily MFS_1 n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PY54_CATAD
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACU73514.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphil
major facilitator superfamily protein
13_1_20cm_3_scaffold_157_21
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17157..17720
DNA (564bp) protein (188aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=319003 sp
Putative 3-methyladenine DNA glycosylase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2Q8Q9_9BRAD
3-methyladenine DNA glycosylase
13_1_20cm_3_scaffold_157_22
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17695..19953)
DNA (2259bp) protein (753aa)
penicillin-binding protein 1A; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] Tax=RBG_16_Actinobacteria_64_13_curated
Penicillin-binding protein, 1A family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0A0_CONWI
penicillin-binding protein
13_1_20cm_3_scaffold_157_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(20072..20761)
DNA (690bp) protein (230aa)
Anti-sigma-K factor RskA n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2PDK3_STRVO
SCI11.11c; hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
anti-sigma-K factor RskA
13_1_20cm_3_scaffold_157_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(20734..21345)
DNA (612bp) protein (204aa)
RNA polymerase subunit sigma-24 n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDC89
sigK; RNA polymerase sigma factor, ECF family Tax=RBG_16_Actinobacteria_68_12_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_3_scaffold_157_25
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

21376..21852
DNA (477bp) protein (159aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
13_1_20cm_3_scaffold_157_26
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

21828..22448
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IF88_PHYMF
Uncharacterized protein {ECO:0000313|EMBL:BAM03926.1}; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensi
hypothetical protein
13_1_20cm_3_scaffold_157_27
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

22508..23830
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2M8C0_9ACTO
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
hypothetical protein
13_1_20cm_3_scaffold_157_28
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

23827..24864
DNA (1038bp) protein (346aa)
High-affinity nickel-transporter n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2JAZ6_NOSP7
high-affinity nickel-transporter Tax=RBG_16_Actinobacteria_68_12_curated
high-affinity nickel-transporter
Displaying 28 items

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