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13_1_20cm_3_scaffold_15991

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_15991_1
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..802)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI0003644D04
copC domain protein
Mycobacterium llatzerense strain CLUC14 Mllat_contig000032, whole genome shotgun sequence {ECO:0000313|EMBL:KIU15125.1}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteria
13_1_20cm_3_scaffold_15991_2
unknown

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comp(799..1383)
DNA (585bp) protein (195aa)

This feature has no annotations

13_1_20cm_3_scaffold_15991_3
unknown

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comp(1367..1645)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_20cm_3_scaffold_15991_4
unknown

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comp(1683..2312)
DNA (630bp) protein (210aa)

This feature has no annotations

13_1_20cm_3_scaffold_15991_5
unknown

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comp(2370..2777)
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_20cm_3_scaffold_15991_6
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2774..3643)
DNA (870bp) protein (290aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; Flag
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
hypothetical protein n=1 Tax=Nocardiopsis salina RepID=UPI00034D1866
13_1_20cm_3_scaffold_15991_7
Gluconobacter frateurii, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3640..4209)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Gluconobacter frateurii RepID=UPI00029A67B9
Uncharacterized protein {ECO:0000313|EMBL:GAN91065.1}; TaxID=1231354 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter
hypothetical protein
13_1_20cm_3_scaffold_15991_8
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4191..4934)
DNA (744bp) protein (248aa)
Hopanoid biosynthesis associated radical SAM protein HpnH n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M6Y5_GEODF
Diploptene adenosyltransferase and reductase {ECO:0000313|EMBL:ACM22006.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source
hopanoid biosynthesis associated radical SAM protein HpnH
13_1_20cm_3_scaffold_15991_9
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5134..6918)
DNA (1785bp) protein (595aa)
shc; squalene-hopene cyclase (EC:5.4.99.17)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000370F559
Squalene-hopene cyclase {ECO:0000313|EMBL:EWM17677.1}; Flags: Fragment;; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;
13_1_20cm_3_scaffold_15991_10
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6915..7508)
DNA (594bp) protein (198aa)
Squalene-associated FAD-dependent desaturase n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IYF8_FRASU
Squalene-associated FAD-dependent desaturase {ECO:0000313|EMBL:ADP83903.1}; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (
squalene-associated FAD-dependent desaturase
13_1_20cm_3_scaffold_15991_11
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8014..8832)
DNA (819bp) protein (273aa)
hopD; squalene/phytoene synthase (EC:2.5.1.32)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00037F9F59
Phytoene synthase {ECO:0000313|EMBL:EQD82226.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
13_1_20cm_3_scaffold_15991_12
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(8829..9626)
DNA (798bp) protein (266aa)
Squalene synthase HpnC n=1 Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9HD62_9BACL
Squalene synthase HpnC {ECO:0000313|EMBL:EJY55424.1}; TaxID=1200346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus hesperidum URH
squalene/phytoene synthase
13_1_20cm_3_scaffold_15991_13
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9738..10100
DNA (363bp) protein (121aa)
Anti-sigma factor antagonist n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y237_THEBD
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC
anti-sigma-factor antagonist
13_1_20cm_3_scaffold_15991_14
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10110..11537)
DNA (1428bp) protein (476aa)
Major facilitator superfamily MFS_1 n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q9T1_CATAD
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACU76250.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphil
major facilitator superfamily protein
13_1_20cm_3_scaffold_15991_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11787..12620)
DNA (834bp) protein (278aa)
Extracellular solute-binding protein family 1 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAW9_ANADF
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=RBG_16_Actinobacteria_68_12_curated
extracellular solute-binding protein
13_1_20cm_3_scaffold_15991_16
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(13126..13953)
DNA (828bp) protein (276aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UM16_ANASK
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
binding-protein-dependent transporters inner membrane component
13_1_20cm_3_scaffold_15991_17
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(13950..14798)
DNA (849bp) protein (283aa)
ABC transporter permease; K02025 multiple sugar transport system permease protein Tax=RBG_16_Armatimonadetes_67_12_curated
ABC transporter permease; K02025 multiple sugar transport system permease protein id=24429355 bin=RBG_19FT_COMBO_GAL15_69_19 species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
sugar ABC transporter inner membrane subunit
13_1_20cm_3_scaffold_15991_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14883..16046
DNA (1164bp) protein (388aa)
ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBT9_CONWI
ABC transporter related protein {ECO:0000313|EMBL:ADB51354.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.
ABC transporter
13_1_20cm_3_scaffold_15991_19
unknown

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comp(16040..16642)
DNA (603bp) protein (201aa)

This feature has no annotations

Displaying 19 items

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