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13_1_20cm_3_scaffold_1662

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1662_1
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3..1412)
DNA (1410bp) protein (470aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ11206.1}; TaxID=44251 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus (Paenibacillus azo
Putative uncharacterized protein id=4913979 bin=GWC2_ACD39_50_8 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_ACD39_50_8 organism_group=ACD39
13_1_20cm_3_scaffold_1662_2
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(1629..2846)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1G2_SPHTD
mrp; protein mrp Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_20cm_3_scaffold_1662_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2980..3372
DNA (393bp) protein (131aa)
uracil-DNA glycosylase n=1 Tax=Methylococcus capsulatus RepID=UPI0003139611
Uracil-DNA glycosylase superfamily {ECO:0000313|EMBL:AHG90276.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Uracil-DNA glycosylase superfamily
13_1_20cm_3_scaffold_1662_4
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3369..3686
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Octadecabacter arcticus 238 RepID=M9RDK9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ETX00178.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_1_20cm_3_scaffold_1662_5
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

3691..4353
DNA (663bp) protein (221aa)
hypothetical protein; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Paenibacillus vortex V453 RepID=E5YU86_9BACL
hypothetical protein
13_1_20cm_3_scaffold_1662_6
unknown

Not on your lists

comp(4350..4652)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_20cm_3_scaffold_1662_7
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

4667..6877
DNA (2211bp) protein (737aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RBX3_AMMDK
GTP-binding protein LepA
13_1_20cm_3_scaffold_1662_8
unknown

Not on your lists

6862..7446
DNA (585bp) protein (195aa)

This feature has no annotations

13_1_20cm_3_scaffold_1662_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7534..8490)
DNA (957bp) protein (319aa)
UDP-glucuronate 4-epimerase (EC:5.1.3.6) Tax=RBG_16_Acidobacteria_70_10_curated
NAD-dependent epimerase/dehydratase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIZ7_THET1
NAD-dependent epimerase/dehydratase
13_1_20cm_3_scaffold_1662_10

Not on your lists

8785..8916
DNA (132bp) protein (44aa)
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8A9_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:KKL79209.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_3_scaffold_1662_11
unknown

Not on your lists

8928..9239
DNA (312bp) protein (104aa)

This feature has no annotations

13_1_20cm_3_scaffold_1662_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

9236..10348
DNA (1113bp) protein (371aa)
coproporphyrinogen III oxidase, anaerobic (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
hemM; Coproporphyrinogen oxidase / Oxygen-independent coproporphyrinogen III oxidase (EC:1.3.3.3)
Coproporphyrinogen oxidase / Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GCY7_PROFC
13_1_20cm_3_scaffold_1662_13
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

10356..11372
DNA (1017bp) protein (339aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZI5_ANATU
hrcA; heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor Tax=RBG_13_Chloroflexi_50_21_curated
hrcA; heat-inducible transcription repressor HrcA
13_1_20cm_3_scaffold_1662_14
GWF2_Melainabacteria_37_15_curated, Melainabacteria, Bacteria

Not on your lists

comp(11413..11829)
DNA (417bp) protein (139aa)
gmd; GDP-D-mannose dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=GWF2_Melainabacteria_37_15_curated
GDP-D-mannose dehydratase id=3523513 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
gmd; GDP-D-mannose dehydratase
13_1_20cm_3_scaffold_1662_15
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11826..12356)
DNA (531bp) protein (177aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=266940 species="Bacter
GDP-mannose 4,6-dehydratase n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W924_KINRD
GDP-mannose 4,6-dehydratase
13_1_20cm_3_scaffold_1662_16
Paenibacillus sp. Y412MC10, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12416..13012
DNA (597bp) protein (199aa)
Protein GrpE n=1 Tax=Geobacillus sp. (strain Y412MC10) RepID=D3E4Z4_GEOS4
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=481743 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paeni
GrpE protein
13_1_20cm_3_scaffold_1662_17
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13025..14146
DNA (1122bp) protein (374aa)
Chaperone protein DnaJ n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KMH5_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" sour
chaperone protein DnaJ
13_1_20cm_3_scaffold_1662_18
unknown

Not on your lists

14360..14701
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_20cm_3_scaffold_1662_19
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14879..18322
DNA (3444bp) protein (1148aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Marichromatium purpuratum 984 RepID=F9U172_MARPU rbh
response regulator receiver/GGDEF/PAS/PAC domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
diguanylate cyclase
13_1_20cm_3_scaffold_1662_20
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

18402..19241
DNA (840bp) protein (280aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=RBG_16_Acidobacteria_70_10_curated
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4F09
13_1_20cm_3_scaffold_1662_21
R_RIF_OP11_02_39_21, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

19669..22173
DNA (2505bp) protein (835aa)
PE-PGRS FAMILY protein n=23 Tax=Mycobacterium tuberculosis RepID=L0NYE3_MYCTU id=5087020 bin=GWF1_OP11_31_35_complete species=Mycobacterium tuberculosis genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_02_39_21_curated
putative glycosyltransferase
13_1_20cm_3_scaffold_1662_22
R_RIF_OP11_02_39_21, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

22170..22757
DNA (588bp) protein (196aa)
transmembrane_regions 107..129 Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_02_39_21_curated
transmembrane_regions 107..129 id=1246952 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
13_1_20cm_3_scaffold_1662_23
unknown

Not on your lists

22754..22906
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying 23 items

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