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13_1_20cm_3_scaffold_168

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_168_1
unknown

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1..66
DNA (66bp) protein (22aa)

This feature has no annotations

13_1_20cm_3_scaffold_168_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(329..3001)
DNA (2673bp) protein (891aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZP2_THERP
13_1_20cm_3_scaffold_168_3
unknown

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comp(3168..3491)
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_20cm_3_scaffold_168_4
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(3714..4076)
DNA (363bp) protein (121aa)
Cupin 2, conserved barrel domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3K3_THERP
Cupin 2, conserved barrel domain protein {ECO:0000313|EMBL:ACM06449.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium r
cupin 2, conserved barrel domain protein
13_1_20cm_3_scaffold_168_5
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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comp(4081..5355)
DNA (1275bp) protein (425aa)
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=RBG_16_RIF_CHLX_70_13_curated
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX id=14628678 bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
ATP-dependent Clp protease ATP-binding subunit ClpX
13_1_20cm_3_scaffold_168_6
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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comp(5359..6027)
DNA (669bp) protein (223aa)
ATP-dependent Clp protease, proteolytic subunit ClpP Tax=CSP1_4_Chloroflexi
ATP-dependent Clp protease, proteolytic subunit ClpP id=14628677 bin=bin8_Chloro species=Anaerobaculum mobile genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin8_Chloro organism_group=Chloroflexi
ATP-dependent Clp protease, proteolytic subunit ClpP
13_1_20cm_3_scaffold_168_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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6191..8245
DNA (2055bp) protein (685aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Kte
GAF sensor signal transduction histidine kinase (EC:2.7.13.3)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMK2_9CHLR
13_1_20cm_3_scaffold_168_8
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8242..8607
DNA (366bp) protein (122aa)
Two-component response regulator n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LR2_SYMTH
Two-component response regulator {ECO:0000313|EMBL:BAD41384.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium th
two-component response regulator
13_1_20cm_3_scaffold_168_9
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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8607..9752
DNA (1146bp) protein (382aa)
Response regulator receiver protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3C9_ANATU
Response regulator receiver protein {ECO:0000313|EMBL:BAJ62943.1}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermo
response regulator receiver protein
13_1_20cm_3_scaffold_168_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9815..10789
DNA (975bp) protein (325aa)
carboxymethylenebutenolidase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Carboxymethylenebutenolidase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AWK9_HERA2
carboxymethylenebutenolidase
13_1_20cm_3_scaffold_168_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10830..11996
DNA (1167bp) protein (389aa)
SpoIID/LytB domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
sulfotransferase family protein
Putative uncharacterized protein id=8266857 bin=CD_OP8_4m species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
13_1_20cm_3_scaffold_168_12
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12006..13463)
DNA (1458bp) protein (486aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
Trigger factor n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKT3_THEM7
trigger factor
13_1_20cm_3_scaffold_168_13
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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13476..13829
DNA (354bp) protein (118aa)
id=3810781 Tax=GWC2_RIF_CHLX_73_18_curated
id=3810781 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_20cm_3_scaffold_168_14
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

13829..14731
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037AA8E0
6-phosphogluconate dehydrogenase NAD-binding {ECO:0000313|EMBL:ABU59393.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" so
NAD-binding 6-phosphogluconate dehydrogenase
13_1_20cm_3_scaffold_168_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

14823..15743
DNA (921bp) protein (307aa)
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain n=3 Tax=Caldanaerobacter subterraneus RepID=Q8R9A0_THETN
response regulator receiver modulated diguanylate cyclase Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
phoB2; phosphate regulon transcriptional regulatory protein PhoB
13_1_20cm_3_scaffold_168_16
unknown

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15948..16232
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_20cm_3_scaffold_168_17
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(16336..16668)
DNA (333bp) protein (111aa)
Uncharacterized protein {ECO:0000313|EMBL:CCF84762.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
Uncharacterized protein id=4916055 bin=GWC2_Methylomirabilis_70_16 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_20cm_3_scaffold_168_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(16738..17568)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G9M5_SORC5
beta-lactamase superfamily hydrolase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_3_scaffold_168_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(17565..18815)
DNA (1251bp) protein (417aa)
Metal dependent phosphohydrolase n=1 Tax=uncultured bacterium RepID=K2EXN8_9BACT
metal-dependent phosphohydrolase HD sub domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
cyclic di-GMP phosphodiesterase response regulator RpfG
13_1_20cm_3_scaffold_168_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(18815..19309)
DNA (495bp) protein (165aa)
GAF domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Diguanylate cyclase id=2081355 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
metal-dependent phosphohydrolase
13_1_20cm_3_scaffold_168_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(19313..19477)
DNA (165bp) protein (55aa)
putative transmembrane sensor domain protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Displaying 21 items

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