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13_1_20cm_3_scaffold_1818

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1818_1
RBG_13_Chloroflexi_48_10_curated, Chloroflexi, Bacteria

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3..647
DNA (645bp) protein (215aa)
gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RBG_13_Chloroflexi_48_10_curated
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=TSAD_THERP
O-sialoglycoprotein endopeptidase
13_1_20cm_3_scaffold_1818_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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649..1071
DNA (423bp) protein (141aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_1818_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1093..1914
DNA (822bp) protein (274aa)
HDIG domain-containing protein; K09163 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
metal dependent phosphohydrolase; K09163 hypothetical protein id=24482170 bin=RBG_19FT_COMBO_GAL15_69_19 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
metal dependent phosphohydrolase
13_1_20cm_3_scaffold_1818_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1949..2401
DNA (453bp) protein (151aa)
NUDIX hydrolase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
NUDIX hydrolase id=14629704 bin=bin8_Chloro species=Gordonia kroppenstedtii genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
NUDIX hydrolase
13_1_20cm_3_scaffold_1818_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2401..3501
DNA (1101bp) protein (367aa)
Aminomethyltransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XKA6_SORCE
glycine cleavage system protein T Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
glycine cleavage system protein T
13_1_20cm_3_scaffold_1818_6
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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3569..3973
DNA (405bp) protein (135aa)
Glycine cleavage system H protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=GCSH_CARHZ
Glycine cleavage system H protein {ECO:0000255|HAMAP-Rule:MF_00272}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source
gcvH; glycine cleavage system H protein
13_1_20cm_3_scaffold_1818_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4032..5351
DNA (1320bp) protein (440aa)
glycine dehydrogenase subunit 1; K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Alicyclobacillus acidocaldarius (strain Tc-4-1) RepID=F8IL61_ALIAT
gcvPA; glycine dehydrogenase
13_1_20cm_3_scaffold_1818_8
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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5348..6844
DNA (1497bp) protein (499aa)
glycine dehydrogenase subunit beta (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] Tax=GWC2_RIF_CHLX_73_18_curated
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 2 id=4074788 bin=GWC2_Chloroflexi_73_18 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_20cm_3_scaffold_1818_9
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

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6826..7656
DNA (831bp) protein (277aa)
NLP/P60 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RGC8_MOOTA
NLP/P60 Tax=RBG_16_Armatimonadetes_58_9_curated
NLP/P60
13_1_20cm_3_scaffold_1818_10
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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7653..8318
DNA (666bp) protein (222aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AW11_HERA2
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_RIF_CHLX_72_14_curated
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_3_scaffold_1818_11
unknown

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8315..8890
DNA (576bp) protein (192aa)

This feature has no annotations

13_1_20cm_3_scaffold_1818_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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8982..10469
DNA (1488bp) protein (496aa)
ABC-type transporter, periplasmic subunit n=6 Tax=Pelosinus RepID=I8RET1_9FIRM
ABC-type dipeptide transport system; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ABC-type transporter, periplasmic subunit
13_1_20cm_3_scaffold_1818_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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10594..12225
DNA (1632bp) protein (544aa)
Extracellular solute-binding protein family 5 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G386_CHLAD rbh
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
family 5 extracellular solute-binding protein
13_1_20cm_3_scaffold_1818_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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12338..13258
DNA (921bp) protein (307aa)
Nickel-transporting ATPase n=5 Tax=Dehalococcoides mccartyi RepID=A5FQK1_DEHSB
binding-protein-dependent transport system inner membrane protein; K15581 oligopeptide transport system permease protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
binding-protein-dependent transporters inner membrane component
13_1_20cm_3_scaffold_1818_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13258..13395
DNA (138bp) protein (46aa)
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_1818_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13413..14156
DNA (744bp) protein (248aa)
Oligopeptide transport system permease protein appC n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EHA8_9CHLR
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
binding-protein-dependent transport system inner membrane protein
13_1_20cm_3_scaffold_1818_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

14210..15328
DNA (1119bp) protein (373aa)
Oligopeptide ABC transporter, ATP-binding protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0D6_THERP rbh
oligopeptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
oligopeptide ABC transporter ATP-binding protein
13_1_20cm_3_scaffold_1818_18
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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15340..15831
DNA (492bp) protein (164aa)
Putative oligopeptide ABC transporter ATP-binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1L3_CALAS
Putative oligopeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAL99150.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="
putative oligopeptide ABC transporter ATP-binding protein
Displaying 18 items

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