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13_1_20cm_3_scaffold_1996

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1996_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..1338)
DNA (1338bp) protein (446aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA50_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG91742.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_1996_2
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1435..1971
DNA (537bp) protein (179aa)
CDP-alcohol phosphatidyltransferase family protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PDF7_9DELT
CDP-alcohol phosphatidyltransferase family protein {ECO:0000313|EMBL:EPX61081.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae
CDP-alcohol phosphatidyltransferase
13_1_20cm_3_scaffold_1996_3
unknown

Not on your lists

1979..2473
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_20cm_3_scaffold_1996_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2457..2765)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA48_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG91738.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_1996_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2847..3689)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA47_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG91737.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_1996_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3761..4552
DNA (792bp) protein (264aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA46_GEMAT
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative oxidoreductase
13_1_20cm_3_scaffold_1996_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4561..5001
DNA (441bp) protein (147aa)
Vitamin K epoxide reductase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCX5_THET1
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
vitamin K epoxide reductase
13_1_20cm_3_scaffold_1996_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5212..5592)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA45_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG91734.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_1996_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5750..6637)
DNA (888bp) protein (296aa)
protein of unknown function DUF4382
Uncharacterized protein {ECO:0000313|EMBL:AHG89207.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_3_scaffold_1996_10
unknown

Not on your lists

comp(6845..7546)
DNA (702bp) protein (234aa)

This feature has no annotations

13_1_20cm_3_scaffold_1996_11
unknown

Not on your lists

comp(7573..7668)
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_20cm_3_scaffold_1996_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7689..8858)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6Z1_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_3_scaffold_1996_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8902..9528)
DNA (627bp) protein (209aa)
Glycoside hydrolase family 13 domain protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7TEP7_9DELT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glycoside hydrolase family 13 domain protein
13_1_20cm_3_scaffold_1996_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9521..10069)
DNA (549bp) protein (183aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3L0_GEMAT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_3_scaffold_1996_15
unknown

Not on your lists

comp(10122..10661)
DNA (540bp) protein (180aa)

This feature has no annotations

13_1_20cm_3_scaffold_1996_16
unknown

Not on your lists

comp(10658..11095)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_20cm_3_scaffold_1996_17
unknown

Not on your lists

comp(11110..13797)
DNA (2688bp) protein (896aa)

This feature has no annotations

13_1_20cm_3_scaffold_1996_18
unknown

Not on your lists

comp(13794..14012)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_20cm_3_scaffold_1996_19
unknown

Not on your lists

comp(14009..14287)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_20cm_3_scaffold_1996_20
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(14294..15184)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U9M0_OCEP5
Uncharacterized protein {ECO:0000313|EMBL:ADR37184.1}; Flags: Precursor;; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus
hypothetical protein
13_1_20cm_3_scaffold_1996_21
unknown

Not on your lists

comp(15188..15766)
DNA (579bp) protein (193aa)

This feature has no annotations

13_1_20cm_3_scaffold_1996_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16103..17467)
DNA (1365bp) protein (455aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-R
Acetyl-coenzyme A synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ACSA_GEMAT
Acetyl-coenzyme A synthetase
13_1_20cm_3_scaffold_1996_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17540..18067)
DNA (528bp) protein (176aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-R
Acetyl-coenzyme A synthetase n=2 Tax=uncultured candidate division OP1 bacterium RepID=H5SS75_9BACT
Acetyl-coenzyme A synthetase
13_1_20cm_3_scaffold_1996_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18161..18892
DNA (732bp) protein (244aa)
Putative heme exporter protein CcmA {ECO:0000313|EMBL:BAH39641.1}; EC=3.6.3.41 {ECO:0000313|EMBL:BAH39641.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Ge
ccmA; putative heme exporter protein CcmA (EC:3.6.3.41)
Putative heme exporter protein CcmA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA43_GEMAT
13_1_20cm_3_scaffold_1996_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18885..19565
DNA (681bp) protein (227aa)
Heme exporter protein CcmB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA42_GEMAT
Cytochrome c-type biogenesis protein CcmB {ECO:0000313|EMBL:AHG91728.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cytochrome c-type biogenesis protein CcmB
13_1_20cm_3_scaffold_1996_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19661..20332
DNA (672bp) protein (224aa)
Heme exporter protein CcmC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA41_GEMAT
Cytochrome c assembly protein {ECO:0000313|EMBL:AHG91727.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cytochrome c assembly protein
13_1_20cm_3_scaffold_1996_27

Not on your lists

20432..21571
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PFE6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH75182.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_1_20cm_3_scaffold_1996_28
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

21577..23091
DNA (1515bp) protein (505aa)
Uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase {ECO:0000313|EMBL:ABG04924.1}; EC=2.1.1.107 {ECO:0000313|EMBL:ABG04924.1};; EC=4.2.1.75 {ECO:0000313|EMBL:ABG04924.1};; TaxID=2
uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUK4_RUBXD
13_1_20cm_3_scaffold_1996_29
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23081..24055
DNA (975bp) protein (325aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA38_GEMAT rbh
13_1_20cm_3_scaffold_1996_30
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24056..25036
DNA (981bp) protein (327aa)
delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24] Tax=GWB2_Deltaproteobacteria_55_19_curated
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase id=3357383 bin=GWC2_Deltaproteobacteria_56_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
Displaying items 1-30 of 33 in total

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