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13_1_20cm_3_scaffold_219

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_219_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

1..1689
DNA (1689bp) protein (563aa)
ATP-dependent transcriptional regulator, MalT-like, LuxR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZX6_CONWI
ATP-dependent transcriptional regulator, MalT-like, LuxR family {ECO:0000313|EMBL:ADB49952.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae;
LuxR family ATP-dependent transcriptional regulator
13_1_20cm_3_scaffold_219_2
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1697..2107)
DNA (411bp) protein (137aa)
membrane protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026255CC
Integral membrane protein {ECO:0000313|EMBL:AIJ23351.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.
integral membrane protein
13_1_20cm_3_scaffold_219_3
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2185..2649
DNA (465bp) protein (155aa)
Ion transport 2 domain protein n=1 Tax=Frankia sp. CN3 RepID=G6H9Y6_9ACTO
Ion transport 2 domain protein {ECO:0000313|EMBL:ADP79622.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
Ion transport 2 domain-containing protein
13_1_20cm_3_scaffold_219_4
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2646..3482)
DNA (837bp) protein (279aa)
Uncharacterized conserved protein n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7N075_SACVD
Uncharacterized conserved protein {ECO:0000313|EMBL:ACU97611.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora v
hypothetical protein
13_1_20cm_3_scaffold_219_5
unknown

Not on your lists

comp(3656..4078)
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_20cm_3_scaffold_219_6
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(4075..4848)
DNA (774bp) protein (258aa)
RDD domain containing protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UTN5_ROSS1
RDD domain containing protein {ECO:0000313|EMBL:ABQ89988.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflex
RDD domain-containing protein
13_1_20cm_3_scaffold_219_7
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4826..5266)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI00035EEFBD
Uncharacterized protein {ECO:0000313|EMBL:KJE23287.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
hypothetical protein
13_1_20cm_3_scaffold_219_8
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5266..5775)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EXV2_MODMB
Uncharacterized protein {ECO:0000313|EMBL:KHD73414.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
13_1_20cm_3_scaffold_219_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5798..6082)
DNA (285bp) protein (95aa)
Putative transmembrane protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAB9_CONWI
Putative transmembrane protein {ECO:0000313|EMBL:ADB49188.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibac
transmembrane protein
13_1_20cm_3_scaffold_219_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

6159..7322
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAB8_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB49187.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" sourc
hypothetical protein
13_1_20cm_3_scaffold_219_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7327..7737)
DNA (411bp) protein (137aa)
membrane protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00035CA069
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
integral membrane protein
13_1_20cm_3_scaffold_219_12
Lawsonia intracellularis, Lawsonia, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7854..8330
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Lawsonia intracellularis RepID=M1GG18_LAWIN
Uncharacterized protein {ECO:0000313|EMBL:CAJ54115.1}; TaxID=363253 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Lawsonia.;" source="Lawsonia intrac
hypothetical protein
13_1_20cm_3_scaffold_219_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8276..9379
DNA (1104bp) protein (368aa)
Putative Glycosyl transferase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EWH5_MODMB
putative Phosphatidylglycerol lysyltransferase Tax=RBG_16_Actinobacteria_68_12_curated
glycosyl transferase
13_1_20cm_3_scaffold_219_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

9379..9699
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036EE720
Membrane protein, putative {ECO:0000313|EMBL:CBE67523.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
hypothetical protein
13_1_20cm_3_scaffold_219_15
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9671..10888)
DNA (1218bp) protein (406aa)
Transmembrane protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TML1_METAC
Putative integral membrane protein {ECO:0000313|EMBL:AKB24803.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Metha
transmembrane protein
13_1_20cm_3_scaffold_219_16
unknown

Not on your lists

comp(10890..11399)
DNA (510bp) protein (170aa)

This feature has no annotations

13_1_20cm_3_scaffold_219_17
Streptomyces bottropensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11685..12377)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Streptomyces bottropensis ATCC 25435 RepID=M3ESS8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EMF52148.1}; TaxID=1054862 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bottropensis ATCC 2543
hypothetical protein
13_1_20cm_3_scaffold_219_18
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12382..12627)
DNA (246bp) protein (82aa)
Putative MFS transporter n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H1Z7_ACTM4
Putative MFS transporter {ECO:0000313|EMBL:BAL87034.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strai
putative MFS transporter
13_1_20cm_3_scaffold_219_19
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12676..13029
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RPK7_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EEP71330.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC
hypothetical protein
13_1_20cm_3_scaffold_219_20
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14038..14976
DNA (939bp) protein (313aa)
amylo-alpha-1,6-glucosidase n=1 Tax=Salinispora pacifica RepID=UPI00036857DC
Amylo-alpha-1,6-glucosidase {ECO:0000313|EMBL:EWS99873.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-
amylo-alpha-1,6-glucosidase
13_1_20cm_3_scaffold_219_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15085..16479)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XN73_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AGP33210.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
hypothetical protein
13_1_20cm_3_scaffold_219_22
unknown

Not on your lists

16646..16876
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_3_scaffold_219_23
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16884..18056)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E687_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10785.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
low temperature requirement protein A
13_1_20cm_3_scaffold_219_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

18128..18790
DNA (663bp) protein (221aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AST2_RUBXD
two component LuxR family transcriptional regulator Tax=RBG_16_Actinobacteria_68_12_curated
two component LuxR family transcriptional regulator
13_1_20cm_3_scaffold_219_25
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18784..19383)
DNA (600bp) protein (200aa)
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
Isoprenylcysteine carboxyl methyltransferase family protein id=1718223 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
isoprenylcysteine carboxyl methyltransferase
13_1_20cm_3_scaffold_219_26
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19392..20276)
DNA (885bp) protein (295aa)
Type II secretion system F domain n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S8T3_INTC7
Type II secretion system F domain {ECO:0000313|EMBL:ADU47052.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intras
type II secretion system F domain
13_1_20cm_3_scaffold_219_27
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20280..22136)
DNA (1857bp) protein (619aa)
Putative type II secretion system integral membrane subunit n=1 Tax=Rhodococcus equi (strain 103S) RepID=E4WG55_RHOE1
Putative type II secretion system integral membrane subunit {ECO:0000313|EMBL:CBH47909.1}; TaxID=685727 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodo
type ii secretion system integral membrane subunit
13_1_20cm_3_scaffold_219_28
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22133..23509)
DNA (1377bp) protein (459aa)
Type II secretion system protein E n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLD3_NOCSJ
Uncharacterized protein {ECO:0000313|EMBL:KJK44650.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Noc
type II secretion system protein E
13_1_20cm_3_scaffold_219_29
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(23506..24669)
DNA (1164bp) protein (388aa)
Cobyrinic acid a,c-diamide synthase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S8T0_INTC7
response regulator receiver protein; K02282 pilus assembly protein CpaE Tax=RBG_16_Actinobacteria_68_12_curated
cobyrinic acid a,c-diamide synthase
13_1_20cm_3_scaffold_219_30
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24659..25447)
DNA (789bp) protein (263aa)
SAF domain-containing protein; K02279 pilus assembly protein CpaB Tax=CG_Solirubrobact_01
Displaying items 1-30 of 37 in total

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