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13_1_20cm_3_scaffold_2329

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2329_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(1..615)
DNA (615bp) protein (205aa)
PASTA domain protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIS0_KORVE
PASTA domain protein {ECO:0000313|EMBL:ABF43230.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter v
protein PASTA domain-containing protein
13_1_20cm_3_scaffold_2329_2
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

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comp(563..964)
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3E9_ACIC5
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
hypothetical protein
13_1_20cm_3_scaffold_2329_3
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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comp(990..1511)
DNA (522bp) protein (174aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000313|EMBL:CCW36527.1};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:
3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33 4.2.1.35)
3-isopropylmalate dehydratase small subunit n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZR4_9BACT
13_1_20cm_3_scaffold_2329_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1508..3067)
DNA (1560bp) protein (520aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
isopropylmalate isomerase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=LEUC_SYMTH
13_1_20cm_3_scaffold_2329_5
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(3078..4196)
DNA (1119bp) protein (373aa)
Transporter, major facilitator family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1FA42_ACIC5
Transporter, major facilitator family {ECO:0000313|EMBL:ACO32778.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsul
major facilitator family transporter
13_1_20cm_3_scaffold_2329_6
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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4358..5167
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037F5B97
Glycosyl transferase family 2 {ECO:0000313|EMBL:EFL52783.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desu
glycosyl transferase
13_1_20cm_3_scaffold_2329_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(5187..6695)
DNA (1509bp) protein (503aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIC2_KORVE rbh
Uncharacterized protein {ECO:0000313|EMBL:ABF43378.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
hypothetical protein
13_1_20cm_3_scaffold_2329_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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6826..7971
DNA (1146bp) protein (382aa)
DegP2 peptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II85_KORVE
DegP2 peptidase {ECO:0000313|EMBL:ABF43415.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versat
peptidase S1 and S6, chymotrypsin/Hap
13_1_20cm_3_scaffold_2329_9
unknown

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comp(8226..8609)
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_20cm_3_scaffold_2329_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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8914..9246
DNA (333bp) protein (111aa)
Xylose isomerase-like TIM barrel n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHQ2_KORVE
Xylose isomerase-like TIM barrel {ECO:0000313|EMBL:ABF43598.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
xylose isomerase
13_1_20cm_3_scaffold_2329_11
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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9336..10661
DNA (1326bp) protein (442aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {EC
asnC; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9P5_ACIC5 rbh
13_1_20cm_3_scaffold_2329_12

Not on your lists

10701..11543
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000365C661
Marine sediment metagenome DNA, contig: S12H4_C01894 {ECO:0000313|EMBL:GAI65160.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
LmbE family protein
13_1_20cm_3_scaffold_2329_13
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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11550..12491
DNA (942bp) protein (314aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Aci
rocF; arginase (EC:3.5.3.1)
arginase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036EDA01
13_1_20cm_3_scaffold_2329_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12612..14096
DNA (1485bp) protein (495aa)
Anthranilate synthase, component I {ECO:0000313|EMBL:ABF43120.1}; EC=4.1.3.27 {ECO:0000313|EMBL:ABF43120.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candid
Anthranilate synthase, component I n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ30_KORVE rbh
anthranilate synthase, component I
13_1_20cm_3_scaffold_2329_trna_1
unknown

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14459..14531
DNA (73bp)
transferRNA
13_1_20cm_3_scaffold_2329_15
Leptospirillum ferrooxidans, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(14553..15671)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0IKN4_LEPFC
Uncharacterized protein {ECO:0000313|EMBL:BAM05833.1}; TaxID=1162668 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrooxidans (strain C2-3).
hypothetical protein
13_1_20cm_3_scaffold_2329_16
Yarrowia lipolytica, Yarrowia, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

16128..16895
DNA (768bp) protein (256aa)
YALI0E05819p n=1 Tax=Yarrowia lipolytica (strain CLIB 122 / E 150) RepID=Q6C6W0_YARLI
YALI0E05819p {ECO:0000313|EMBL:CAG79183.1}; TaxID=284591 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia.;" source="Yarrow
cell wall surface anchor family protein
Displaying 17 items

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