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13_1_20cm_3_scaffold_234

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_234_1
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1..504)
DNA (504bp) protein (168aa)
cyanophycin synthetase; K03802 cyanophycin synthetase [EC:6.-.-.-] Tax=RBG_16_RIF_CHLX_70_13_curated
cyanophycin synthetase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B6BF42
cyanophycin synthetase
13_1_20cm_3_scaffold_234_2
Crocosphaera watsonii, Crocosphaera, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(546..1514)
DNA (969bp) protein (323aa)
Cyanophycin synthase {ECO:0000313|EMBL:CCQ56218.1}; EC=6.3.2.29 {ECO:0000313|EMBL:CCQ56218.1};; TaxID=423472 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Crocosphaera.;" sou
Cytoplasmic peptidoglycan synthetase, N-terminal:ATP-dependent carboxylate-amine ligase-like, ATP-grasp:Cytoplasmic peptidoglycan synthetases, C-terminal n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4BUZ3_CROWT
cyanophycin synthetase
13_1_20cm_3_scaffold_234_3
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(1544..3118)
DNA (1575bp) protein (525aa)
Cyanophycin synthetase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QLU9_9CYAN
Cyanophycin synthetase {ECO:0000313|EMBL:AGY58665.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
cphA; cyanophycin synthetase
13_1_20cm_3_scaffold_234_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(3402..3977)
DNA (576bp) protein (192aa)
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12); K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=RBG_16_Acidobacteria_70_10_curated
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12); K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] id=12555412 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
13_1_20cm_3_scaffold_234_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3977..5089)
DNA (1113bp) protein (371aa)
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC88_GEMAT
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:AHG89597.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
delta-1-pyrroline-5-carboxylate dehydrogenase
13_1_20cm_3_scaffold_234_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5277..6029
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC87_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG89598.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_234_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(6049..6813)
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SI1_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:ABJ87389.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
hypothetical protein
13_1_20cm_3_scaffold_234_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6924..7817
DNA (894bp) protein (298aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
Putative endonuclease IV n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC86_GEMAT
endonuclease 4
13_1_20cm_3_scaffold_234_9
Bdellovibrio exovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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8001..8390
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Bdellovibrio exovorus JSS RepID=M4V9C3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:AGH95828.1}; TaxID=1184267 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio
hypothetical protein
13_1_20cm_3_scaffold_234_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8469..9182
DNA (714bp) protein (238aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Signal peptidase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC84_GEMAT
signal peptidase I
13_1_20cm_3_scaffold_234_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9255..9866
DNA (612bp) protein (204aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC82_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG89604.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_234_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9863..10294)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC79_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG89607.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF1094
13_1_20cm_3_scaffold_234_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10562..11848)
DNA (1287bp) protein (429aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC69_GEMAT
Hypothetical membrane protein {ECO:0000313|EMBL:BAH40096.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
hypothetical membrane protein
13_1_20cm_3_scaffold_234_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11841..12836)
DNA (996bp) protein (332aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC68_GEMAT
ABC transporter related protein {ECO:0000313|EMBL:AHG89612.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ABC transporter related protein
13_1_20cm_3_scaffold_234_15
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12890..13633
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XE72_9CHRO
putative permease Tax=GWA2_Gallionellales_59_43_curated
protein of unknown function DUF81
13_1_20cm_3_scaffold_234_16
Providencia rettgeri, Providencia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13642..14085
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Providencia rettgeri Dmel1 RepID=K8W7T6_PRORE
Uncharacterized protein {ECO:0000313|EMBL:EKT56718.1}; TaxID=1141663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Providencia.;" source="Providencia r
hypothetical protein
13_1_20cm_3_scaffold_234_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14082..14981)
DNA (900bp) protein (300aa)
Putative M23B family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X7_GEMAT
Putative M23B family peptidase {ECO:0000313|EMBL:BAH37987.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (st
putative M23B family peptidase
13_1_20cm_3_scaffold_234_18
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15006..16895
DNA (1890bp) protein (630aa)
peptidase M61 n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B3FC08
Uncharacterized protein {ECO:0000313|EMBL:AII54019.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
hypothetical protein
13_1_20cm_3_scaffold_234_19
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16966..17364
DNA (399bp) protein (133aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SAR8_HAHCH
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:ABC32256.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hah
hypothetical protein
13_1_20cm_3_scaffold_234_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17365..18624
DNA (1260bp) protein (420aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVY8_VARPE
putative RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_3_scaffold_234_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18608..20326)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA78_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_3_scaffold_234_22
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20373..20594)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00036438FC
Uncharacterized protein {ECO:0000313|EMBL:EJF11901.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
hypothetical protein
13_1_20cm_3_scaffold_234_23
unknown

Not on your lists

comp(20654..21088)
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_20cm_3_scaffold_234_24
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21625..22050)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037DA83C
Uncharacterized protein {ECO:0000313|EMBL:AAZ97015.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
hypothetical protein
13_1_20cm_3_scaffold_234_25
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22114..22512)
DNA (399bp) protein (133aa)
Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GCA3_9DELT
Two component transcriptional regulator, LuxR family protein {ECO:0000313|EMBL:EDM76552.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocyst
regulatory protein LuxR
13_1_20cm_3_scaffold_234_26
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(22528..23124)
DNA (597bp) protein (199aa)
Trypsin-like serine protease with C-terminal PDZ domain n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T4S2_9CYAN
Peptidase S1 and S6, chymotrypsin/Hap {ECO:0000313|EMBL:KIF37697.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
peptidase S1 and S6 chymotrypsin/Hap
13_1_20cm_3_scaffold_234_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23121..24050)
DNA (930bp) protein (310aa)
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:AHG88993.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PDZ/DHR/GLGF domain protein
putative protease Do id=14632806 bin=bin9_gal15 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
Displaying 27 items

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