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13_1_20cm_3_scaffold_2343

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2343_1

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114..944
DNA (831bp) protein (277aa)
Marine sediment metagenome DNA, contig: S06H3_S05009 {ECO:0000313|EMBL:GAI31538.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_20cm_3_scaffold_2343_2
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(1444..2988)
DNA (1545bp) protein (515aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KT94_9SYNC
Major facilitator transporter {ECO:0000313|EMBL:KJH69489.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
EmrB/QacA subfamily drug resistance transporter
13_1_20cm_3_scaffold_2343_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(3042..4427)
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035CB546 rbh
cyclic nucleotide-binding protein
13_1_20cm_3_scaffold_2343_4
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(4428..5948)
DNA (1521bp) protein (507aa)
chemotaxis protein CheY n=1 Tax=Mastigocladopsis repens RepID=UPI0002D9A642
Chemotaxis protein CheY {ECO:0000313|EMBL:KIJ76458.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
response regulator receiver protein
13_1_20cm_3_scaffold_2343_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(6321..7562)
DNA (1242bp) protein (414aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II86_KORVE
ABC efflux pump, inner membrane subunit {ECO:0000313|EMBL:ABF43414.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter v
efflux ABC transporter inner membrane protein
13_1_20cm_3_scaffold_2343_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(7702..8334)
DNA (633bp) protein (211aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=204669 species="Bacteria; Ac
Dephospho-CoA kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II77_KORVE
dephospho-CoA kinase
13_1_20cm_3_scaffold_2343_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(8428..9369)
DNA (942bp) protein (314aa)
Bifunctional protein FolD {ECO:0000255|HAMAP-Rule:MF_01576}; Includes:; Methylenetetrahydrofolate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=1.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01576};; Includ
Bifunctional protein FolD n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=FOLD_KORVE
methenyltetrahydrofolate cyclohydrolase
13_1_20cm_3_scaffold_2343_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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9477..9860
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVP6_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF39054.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
hypothetical protein
13_1_20cm_3_scaffold_2343_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(9863..10870)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035CAA6D
Abortive infection protein {ECO:0000313|EMBL:ABF42226.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (st
abortive infection protein
13_1_20cm_3_scaffold_2343_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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10922..12130
DNA (1209bp) protein (403aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVT3_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF39017.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
hypothetical protein
13_1_20cm_3_scaffold_2343_11
unknown

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12211..12603
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_20cm_3_scaffold_2343_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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13251..15908
DNA (2658bp) protein (886aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus K
DNA gyrase subunit A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IH79_KORVE rbh
DNA gyrase subunit A
13_1_20cm_3_scaffold_2343_13
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16079..16435)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1ILD9_9BACT
hypothetical protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
hypothetical protein
13_1_20cm_3_scaffold_2343_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(16710..18815)
DNA (2106bp) protein (702aa)
Translation elongation factor 2 (EF-2/EF-G) n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IH98_KORVE rbh
Translation elongation factor 2 (EF-2/EF-G) {ECO:0000313|EMBL:ABF43752.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribact
translation elongation factor G
13_1_20cm_3_scaffold_2343_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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19066..19452
DNA (387bp) protein (129aa)
DoxX n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK69_KORVE
DoxX {ECO:0000313|EMBL:ABF42731.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
DoxX protein
13_1_20cm_3_scaffold_2343_16
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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19934..22210
DNA (2277bp) protein (759aa)
TonB-dependent receptor n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3A3_ACIC5 rbh
TonB-dependent receptor {ECO:0000313|EMBL:ACO32604.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain A
TonB-dependent receptor
13_1_20cm_3_scaffold_2343_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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22319..22675
DNA (357bp) protein (119aa)
redoxin n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B534B0
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems {ECO:0000313|EMBL:CDM66088.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria sub
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
13_1_20cm_3_scaffold_2343_18
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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22784..23209
DNA (426bp) protein (142aa)
Vitamin K epoxide reductase family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F4F9_ACIC5
Vitamin K epoxide reductase family protein {ECO:0000313|EMBL:ACO32109.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium c
vitamin K epoxide reductase family protein
13_1_20cm_3_scaffold_2343_19
unknown

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23271..23414
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_20cm_3_scaffold_2343_20
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(23422..23622)
DNA (201bp) protein (67aa)
Cold-shock DNA-binding protein family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQF5_KORVE
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABF40895.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ver
cold-shock DNA-binding protein family protein
Displaying 20 items

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