ggKbase home page

13_1_20cm_3_scaffold_25487

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_25487_1
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3..194
DNA (192bp) protein (64aa)
Putative short chain dehydrogenase n=1 Tax=Patulibacter medicamentivorans RepID=H0E701_9ACTN
Putative short chain dehydrogenase {ECO:0000313|EMBL:EHN10543.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patu
short-chain dehydrogenase/reductase SDR
13_1_20cm_3_scaffold_25487_2
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

339..563
DNA (225bp) protein (75aa)
FAD dependent oxidoreductase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4ET55_MODMB
FAD dependent oxidoreductase {ECO:0000313|EMBL:CCH86568.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (st
FAD dependent oxidoreductase
13_1_20cm_3_scaffold_25487_3
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

comp(595..1095)
DNA (501bp) protein (167aa)
MarR family transcriptional regulator n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002379E8F
N-acetyltransferase Tax=RBG_13_Bathyarchaeota_52_12_curated
GCN5-like N-acetyltransferase
13_1_20cm_3_scaffold_25487_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

1177..2076
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F717_CONWI
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADB48788.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="C
LysR family transcriptional regulator
13_1_20cm_3_scaffold_25487_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2056..3009)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FD25_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB51537.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" sourc
hypothetical protein
13_1_20cm_3_scaffold_25487_6

Not on your lists

comp(3294..4121)
DNA (828bp) protein (276aa)
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Patulibacter medicamentivorans RepID=H0E4Q4_9ACTN
Short chain dehydrogenase {ECO:0000313|EMBL:AIA11654.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
short-chain dehydrogenase/reductase SDR
13_1_20cm_3_scaffold_25487_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

4270..4740
DNA (471bp) protein (157aa)
Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1H7_CONWI
Cytochrome bd ubiquinol oxidase subunit I {ECO:0000313|EMBL:ADB52140.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source
cytochrome bd ubiquinol oxidase subunit I
13_1_20cm_3_scaffold_25487_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

4765..5472
DNA (708bp) protein (236aa)
Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1H7_CONWI
Cytochrome bd ubiquinol oxidase subunit I {ECO:0000313|EMBL:ADB52140.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source
cytochrome bd ubiquinol oxidase subunit I
13_1_20cm_3_scaffold_25487_9
unknown

Not on your lists

comp(5480..5662)
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_20cm_3_scaffold_25487_10
unknown

Not on your lists

comp(5690..5989)
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_20cm_3_scaffold_25487_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

6316..6624
DNA (309bp) protein (103aa)
Cytochrome bd-type quinol oxidase subunit 2-like protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1H8_CONWI
Cytochrome bd-type quinol oxidase subunit 2-like protein {ECO:0000313|EMBL:ADB52141.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexib
cytochrome bd-type quinol oxidase subunit 2-like protein
13_1_20cm_3_scaffold_25487_12
unknown

Not on your lists

6570..7616
DNA (1047bp) protein (349aa)

This feature has no annotations

13_1_20cm_3_scaffold_25487_13
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7577..8848
DNA (1272bp) protein (424aa)
histidine kinase n=1 Tax=Saccharomonospora halophila RepID=UPI00037C5709
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADB72922.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Ge
multi-sensor signal transduction histidine kinase
13_1_20cm_3_scaffold_25487_14
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8845..9261
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037FF4CC
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL
anti-anti-sigma factor
13_1_20cm_3_scaffold_25487_15
unknown

Not on your lists

comp(9373..10152)
DNA (780bp) protein (260aa)

This feature has no annotations

13_1_20cm_3_scaffold_25487_16
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10232..11191
DNA (960bp) protein (320aa)
Gamma-glutamyltransferase n=1 Tax=Streptomyces auratus AGR0001 RepID=J1RZL5_9ACTO
Gamma-glutamyltransferase {ECO:0000313|EMBL:EJJ03997.1}; TaxID=1160718 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
gamma-glutamyltransferase
13_1_20cm_3_scaffold_25487_17
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11334..11660
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0EBJ8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN08945.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
13_1_20cm_3_scaffold_25487_18
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11714..12793)
DNA (1080bp) protein (360aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZUM3_DESOH
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KFA93253.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cys
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_3_scaffold_25487_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12795..13340)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B5AB6F
Beta-lactamase domain protein {ECO:0000313|EMBL:ADB49510.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibact
beta-lactamase
Displaying 19 items

View Taxonomy