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13_1_20cm_3_scaffold_2764

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2764_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(1..1092)
DNA (1092bp) protein (364aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPG3_KORVE
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein {ECO:0000313|EMBL:ABF41237.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribac
D-isomer specific 2-hydroxyacid dehydrogenase
13_1_20cm_3_scaffold_2764_2
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1139..1831)
DNA (693bp) protein (231aa)
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EFU76882.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaeroba
HAD family hydrolase id=14426776 bin=bin1_lowGC species=Petrotoga mobilis genus=Petrotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=bin1_lowGC organism_group=Unknown_CP
Hydrolase
13_1_20cm_3_scaffold_2764_3
unknown

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1973..2335
DNA (363bp) protein (121aa)

This feature has no annotations

13_1_20cm_3_scaffold_2764_4
unknown

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comp(2383..2565)
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_20cm_3_scaffold_2764_5
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2615..3025
DNA (411bp) protein (137aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillacea
Putative two-component sensor histidine kinase, classical system n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FTR4_PHAMO
PAS domain S-box
13_1_20cm_3_scaffold_2764_6
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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3043..3486
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034DC78C
Response regulator receiver domain protein (CheY-like) {ECO:0000313|EMBL:ABD41447.1}; TaxID=323259 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospi
response regulator receiver domain-containing protein
13_1_20cm_3_scaffold_2764_7

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3647..4246
DNA (600bp) protein (200aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZU0_9BACT
Nicotinate-nucleotide adenylyltransferase
13_1_20cm_3_scaffold_2764_8
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4315..4599
DNA (285bp) protein (95aa)
Ribosomal silencing factor RsfS n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DVR4_METI4
hypothetical protein; K09710 ribosome-associated protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
hypothetical protein
13_1_20cm_3_scaffold_2764_9

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comp(4648..5394)
DNA (747bp) protein (249aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;
Peptidyl-prolyl cis-trans isomerase id=2013706 bin=GWB2_Deltaproteobacteria_65_81 species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
FKBP-type peptidylprolyl cis-trans isomerase
13_1_20cm_3_scaffold_2764_10

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5401..6300
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBE3_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48610.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_3_scaffold_2764_11

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6461..6925
DNA (465bp) protein (155aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZT3_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48609.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ErfK/YbiS/YcfS/YnhG family protein
13_1_20cm_3_scaffold_2764_12

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comp(6989..8224)
DNA (1236bp) protein (412aa)
CinA-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZT4_9BACT
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
competence/damage-inducible protein CinA
13_1_20cm_3_scaffold_2764_13

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comp(8331..9611)
DNA (1281bp) protein (427aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1C5_9BACT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacteri
ATP-dependent Clp protease ATP-binding subunit ClpX
13_1_20cm_3_scaffold_2764_14

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comp(9630..10319)
DNA (690bp) protein (230aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1C4_9BACT
clpP; ATP-dependent Clp protease proteolytic subunit
13_1_20cm_3_scaffold_2764_15

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comp(10316..11173)
DNA (858bp) protein (286aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=77133 spec
Trigger factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1C3_9BACT
trigger factor
13_1_20cm_3_scaffold_2764_16

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comp(11118..11633)
DNA (516bp) protein (172aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=77133 spec
Trigger factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1C3_9BACT
trigger factor
13_1_20cm_3_scaffold_2764_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(11717..12307)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUJ1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY22229.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_3_scaffold_2764_18
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(12459..13574)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMA2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAL86690.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
13_1_20cm_3_scaffold_2764_19
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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comp(13923..15134)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QN44_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:AGY59105.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
hypothetical protein
Displaying 19 items

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