ggKbase home page

13_1_20cm_3_scaffold_2823

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2823_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..833)
DNA (831bp) protein (277aa)
sdhA; succinate dehydrogenase flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000375887B
sdhA; succinate dehydrogenase flavoprotein subunit
13_1_20cm_3_scaffold_2823_2

Not on your lists

comp(834..1640)
DNA (807bp) protein (269aa)
Putative integral membrane protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRW5_KORVE
Uncharacterized protein {ECO:0000313|EMBL:AHN97957.1}; TaxID=1447241 species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
putative integral membrane protein
13_1_20cm_3_scaffold_2823_3
unknown

Not on your lists

comp(1804..2058)
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_20cm_3_scaffold_2823_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2450..3127)
DNA (678bp) protein (226aa)
undecaprenyl pyrophosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
undecaprenyl pyrophosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KN90_METC4
13_1_20cm_3_scaffold_2823_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3223..3609)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E491F
transcriptional regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
transcriptional regulator
13_1_20cm_3_scaffold_2823_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(3602..4219)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DB688
Uncharacterized protein {ECO:0000313|EMBL:ABJ87218.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
hypothetical protein
13_1_20cm_3_scaffold_2823_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4304..4927)
DNA (624bp) protein (208aa)
Intracellular protease, PfpI family n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDU1_THET1
Intracellular protease, PfpI family {ECO:0000313|EMBL:AHG91331.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
intracellular protease, PfpI family
13_1_20cm_3_scaffold_2823_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5045..6115
DNA (1071bp) protein (357aa)
DNA polymerase III delta' subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U0_GEMAT
DNA polymerase III delta' subunit {ECO:0000313|EMBL:AHG91334.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA polymerase III delta' subunit
13_1_20cm_3_scaffold_2823_9
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6112..6588
DNA (477bp) protein (159aa)
UPI0003D06A5E related cluster n=1 Tax=unknown RepID=UPI0003D06A5E
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1287182 species="Bac
moaC; molybdenum cofactor biosynthesis protein C
13_1_20cm_3_scaffold_2823_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6585..7463)
DNA (879bp) protein (293aa)
Cation diffusion facilitator family transporter n=2 Tax=Singulisphaera acidiphila RepID=L0DS85_SINAD
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AGA31261.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" so
cation diffusion facilitator family transporter
13_1_20cm_3_scaffold_2823_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7478..7822)
DNA (345bp) protein (115aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91743.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_3_scaffold_2823_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7923..8195
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD18_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_3_scaffold_2823_13

Not on your lists

8210..9298
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LEA6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EQB62749.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
hypothetical protein
13_1_20cm_3_scaffold_2823_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9308..9970
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4X4_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG90675.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_2823_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(10070..11017)
DNA (948bp) protein (316aa)
Membrane protease subunit, stomatin/prohibitin n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D831_DESAJ
membrane protease subunit, stomatin/prohibitin Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
membrane protease subunit, stomatin/prohibitin
13_1_20cm_3_scaffold_2823_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(11018..11395)
DNA (378bp) protein (126aa)
GntR family transcriptional regulator n=1 Tax=Schlesneria paludicola RepID=UPI00029B22B4
GntR family transcriptional regulator; K07979 GntR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
GntR family transcriptional regulator
13_1_20cm_3_scaffold_2823_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11514..11888)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCG0_ANASK
Uncharacterized protein {ECO:0000313|EMBL:AHG89479.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF156
13_1_20cm_3_scaffold_2823_18
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11905..13662)
DNA (1758bp) protein (586aa)
Copper-translocating P-type ATPase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCG1_ANASK
Copper-translocating P-type ATPase {ECO:0000313|EMBL:ACG74797.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxo
copper-translocating P-type ATPase
Displaying 18 items

View Taxonomy