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13_1_20cm_3_scaffold_283

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_283_1
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..511
DNA (510bp) protein (170aa)
Uncharacterized protein n=2 Tax=Saccharopolyspora erythraea RepID=A4F8C8_SACEN
Uncharacterized protein {ECO:0000313|EMBL:EQD85351.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea
hypothetical protein
13_1_20cm_3_scaffold_283_2
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

508..843
DNA (336bp) protein (112aa)
gas vesicle protein, partial n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF28B
Gas vesicle structural protein {ECO:0000256|RuleBase:RU000632}; TaxID=1203592 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;
gas vesicle protein GvpA
13_1_20cm_3_scaffold_283_3
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

830..1612
DNA (783bp) protein (261aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2PEJ0_STRVO
Gas vesicle synthesis GvpLGvpF {ECO:0000313|EMBL:AEM83321.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger T
gas vesicle synthesis protein GvpLGvpF
13_1_20cm_3_scaffold_283_4
Pelodictyon luteolum, Pelodictyon, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

1609..1797
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B4Z9_PELLD
Uncharacterized protein {ECO:0000313|EMBL:ABB23582.1}; TaxID=319225 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;" source="Pelodictyo
hypothetical protein
13_1_20cm_3_scaffold_283_5
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

1804..2466
DNA (663bp) protein (221aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IGU3_9CHLR
Gas vesicle synthesis GvpLGvpF {ECO:0000313|EMBL:EFO79418.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source=
Gas vesicle synthesis protein GvpL/GvpF
13_1_20cm_3_scaffold_283_6
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

Not on your lists

2463..2780
DNA (318bp) protein (106aa)
gas vesicle protein K Tax=GWF2_Lentisphaerae_38_69_curated
Gas vesicle K id=3661271 bin=GWF2_Lentisphaerae_38_69 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
gas vesicle protein, GvpK
13_1_20cm_3_scaffold_283_7
unknown

Not on your lists

2852..3145
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_20cm_3_scaffold_283_8
unknown

Not on your lists

3151..3543
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_20cm_3_scaffold_283_9
Rhodococcus sp. Chr-9, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3605..4468)
DNA (864bp) protein (288aa)
cyclase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00036698C6
Cyclase {ECO:0000313|EMBL:KHJ73757.1}; TaxID=713612 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. Chr-9.;"
cyclase
13_1_20cm_3_scaffold_283_10
unknown

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4610..5212
DNA (603bp) protein (201aa)

This feature has no annotations

13_1_20cm_3_scaffold_283_11
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5316..5732)
DNA (417bp) protein (139aa)
Putative signal-transduction protein containing cAMP-binding and CBS domains n=1 Tax=Saccharomonospora glauca K62 RepID=I1CZP1_9PSEU
Putative signal-transduction protein containing cAMP-binding and CBS domains {ECO:0000313|EMBL:EIE98165.1}; TaxID=928724 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Sacch
putative signal-transduction protein containing cAMP-binding and CBS domains
13_1_20cm_3_scaffold_283_12
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6379..7368
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI00036F0BF3
Arabinose efflux permease family protein {ECO:0000313|EMBL:AFZ17201.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. P
arabinose efflux permease family protein
13_1_20cm_3_scaffold_283_13
unknown

Not on your lists

comp(7365..7469)
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_20cm_3_scaffold_283_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

7483..9375
DNA (1893bp) protein (631aa)
threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RBG_16_Actinobacteria_68_12_curated
threonyl-tRNA synthetase (EC:6.1.1.3)
Threonyl-tRNA synthetase (Fragment) n=1 Tax=uncultured bacterium RepID=F8UVN5_9BACT rbh
13_1_20cm_3_scaffold_283_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9567..10175
DNA (609bp) protein (203aa)
translation initiation factor IF-3 n=1 Tax=Patulibacter americanus RepID=UPI0003B6D22F
translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RBG_16_Actinobacteria_68_12_curated
translation initiation factor IF-3
13_1_20cm_3_scaffold_283_16
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


10132..10338
DNA (207bp) protein (69aa)
50S ribosomal protein L35 n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DJ47_9BACT
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flav
50S ribosomal protein L35
13_1_20cm_3_scaffold_283_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


10339..10698
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=1 Tax=Eggerthella sp. CAG:368 RepID=R7BNR2_9ACTN
50S ribosomal protein L20P; K02887 large subunit ribosomal protein L20 Tax=RBG_16_Actinobacteria_68_12_curated
50S ribosomal protein L20
13_1_20cm_3_scaffold_283_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10844..11368
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B3C935
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family Tax=RBG_16_Actinobacteria_68_12_curated
tRNA/rRNA methyltransferase SpoU
13_1_20cm_3_scaffold_283_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11394..12092)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00036362EE
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
type 12 methyltransferase
13_1_20cm_3_scaffold_283_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


12243..13268
DNA (1026bp) protein (342aa)
phenylalanyl-tRNA synthetase, subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RBG_16_Actinobacteria_68_12_curated
phenylalanyl-tRNA synthetase, subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0H4_CONWI
13_1_20cm_3_scaffold_283_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13274..13735
DNA (462bp) protein (154aa)
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RBG_16_Actinobacteria_68_12_curated
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0H3_CONWI
Displaying 21 items

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