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13_1_20cm_3_scaffold_2933

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2933_trna_3
unknown

Not on your lists

comp(24..96)
DNA (73bp)
transferRNA
13_1_20cm_3_scaffold_2933_trna_2
unknown

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comp(179..251)
DNA (73bp)
transferRNA
13_1_20cm_3_scaffold_2933_trna_1
unknown

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comp(308..381)
DNA (74bp)
transferRNA
13_1_20cm_3_scaffold_2933_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(428..985)
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=EFP_GEMAT rbh
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Elongation factor P
13_1_20cm_3_scaffold_2933_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1118..1759)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037549C3
Putative acyl-CoA thioesterase {ECO:0000313|EMBL:AHG91223.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative acyl-CoA thioesterase
13_1_20cm_3_scaffold_2933_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1890..2579
DNA (690bp) protein (230aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9H8_GEMAT
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAH39155.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas
putative ABC transporter ATP-binding protein
13_1_20cm_3_scaffold_2933_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2911..5079
DNA (2169bp) protein (723aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9H9_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG91226.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF214
13_1_20cm_3_scaffold_2933_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5185..6954)
DNA (1770bp) protein (590aa)
Peptidase M30, hyicolysin
Peptidase M30, hyicolysin {ECO:0000313|EMBL:AHG89376.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_3_scaffold_2933_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

7188..7646
DNA (459bp) protein (153aa)
MarR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J1_GEMAT
MarR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
MarR family transcriptional regulator
13_1_20cm_3_scaffold_2933_7
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7694..8458)
DNA (765bp) protein (255aa)
Phenylalanine 4-monooxygenase {ECO:0000313|EMBL:ADW69144.1}; EC=1.14.16.1 {ECO:0000313|EMBL:ADW69144.1};; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulice
phenylalanine 4-monooxygenase (EC:1.14.16.1)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037C6016
13_1_20cm_3_scaffold_2933_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8496..9335)
DNA (840bp) protein (280aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E9W1_METMS
ATP-binding region ATPase domain protein
13_1_20cm_3_scaffold_2933_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10106..11380)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACD2_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH40159.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_2933_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11412..12287)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACD2_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH40159.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_2933_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13454..13741
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A633_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG90137.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_2933_12
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13784..14221
DNA (438bp) protein (146aa)
Putative integron gene cassette protein Tax=RBG_13_Deltaproteobacteria_52_11b_curated
13_1_20cm_3_scaffold_2933_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14284..14829
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VSZ3_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP79478.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
13_1_20cm_3_scaffold_2933_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15028..15735
DNA (708bp) protein (236aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACF3_GEMAT
Response regulator receiver {ECO:0000313|EMBL:AHG88027.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
response regulator receiver
13_1_20cm_3_scaffold_2933_15
unknown

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15867..16328
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_20cm_3_scaffold_2933_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16728..17264
DNA (537bp) protein (179aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88836.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_3_scaffold_2933_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17331..17708)
DNA (378bp) protein (126aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88937.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 20 items

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