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13_1_20cm_3_scaffold_295

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_295_1
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1968)
DNA (1968bp) protein (656aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FWY2_ACICJ
Putative Lipoprotein {ECO:0000313|EMBL:CDH46128.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendoba
hypothetical protein
13_1_20cm_3_scaffold_295_2
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

2244..3662
DNA (1419bp) protein (473aa)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:ADW68405.1}; EC=1.1.1.22 {ECO:0000313|EMBL:ADW68405.1};; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulice
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WVF7_ACISM rbh
13_1_20cm_3_scaffold_295_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3659..4615
DNA (957bp) protein (319aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJZ5_KORVE rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABF42805.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
NAD-dependent epimerase/dehydratase
13_1_20cm_3_scaffold_295_4
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4713..5318
DNA (606bp) protein (202aa)
Putative hydrolase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XQV6_DESMR
Putative hydrolase {ECO:0000313|EMBL:BAH77919.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio m
hydrolase
13_1_20cm_3_scaffold_295_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5359..6459
DNA (1101bp) protein (367aa)
Oxidoreductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL19_KORVE rbh
Oxidoreductase {ECO:0000313|EMBL:ABF42431.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin34
oxidoreductase
13_1_20cm_3_scaffold_295_6
unknown

Not on your lists

6520..7233
DNA (714bp) protein (238aa)

This feature has no annotations

13_1_20cm_3_scaffold_295_7
Pseudomonas sp. Chol1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7287..7829)
DNA (543bp) protein (181aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Pseudomonas sp. Chol1 RepID=K5YJQ5_9PSED
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EKM95232.1}; TaxID=440512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud
13_1_20cm_3_scaffold_295_8
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7841..8749)
DNA (909bp) protein (303aa)
glucose-1-phosphate thymidylyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00035FD75E
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:GAO34664.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source=
glucose-1-phosphate thymidylyltransferase
13_1_20cm_3_scaffold_295_9
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8777..9853)
DNA (1077bp) protein (359aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI00_THIDA rbh
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:GAO34663.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella
13_1_20cm_3_scaffold_295_10
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9968..11002)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0FKQ7_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EOA02468.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum f
hypothetical protein
13_1_20cm_3_scaffold_295_11
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11179..11727)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B43940
Uncharacterized protein {ECO:0000313|EMBL:AJE03881.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickering
hypothetical protein
13_1_20cm_3_scaffold_295_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(11862..12845)
DNA (984bp) protein (328aa)
Molybdopterin dehydrogenase, FAD-binding protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFV6_9DELT id=5225105 bin=16ft_combo_ws3_JS1 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hcrB; 4-hydroxybenzoyl-CoA reductase, beta subunit Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hcrB; 4-hydroxybenzoyl-CoA reductase, beta subunit
13_1_20cm_3_scaffold_295_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12842..13366)
DNA (525bp) protein (175aa)
4-hydroxybenzoyl-CoA reductase, alpha subunit {ECO:0000313|EMBL:CDM65155.1}; EC=1.3.7.9 {ECO:0000313|EMBL:CDM65155.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyri
4-hydroxybenzoyl-CoA reductase, alpha subunit (Fragment) n=1 Tax=mine drainage metagenome RepID=T1ALS8_9ZZZZ
4-hydroxybenzoyl-CoA reductase alpha subunit
13_1_20cm_3_scaffold_295_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13485..15446)
DNA (1962bp) protein (654aa)
4-hydroxybenzoyl-CoA reductase, alpha subunit {ECO:0000313|EMBL:CDM65155.1}; EC=1.3.7.9 {ECO:0000313|EMBL:CDM65155.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyri
4-hydroxybenzoyl-CoA reductase subunit alpha n=1 Tax=Thauera aromatica RepID=HCRA_THAAR
4-hydroxybenzoyl-CoA reductase subunit alpha
13_1_20cm_3_scaffold_295_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(15666..16157)
DNA (492bp) protein (164aa)
4-hydroxybenzoyl-CoA reductase, gamma subunit n=2 Tax=mine drainage metagenome RepID=T0XUU9_9ZZZZ
2Fe-2S iron-sulfur cluster binding domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
CoxS; aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
13_1_20cm_3_scaffold_295_16
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(16324..17214)
DNA (891bp) protein (297aa)
3-oxoadipate CoA-transferase (EC:2.8.3.6); K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Coenzyme A transferase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7V7G8_DESML rbh
hypothetical protein
13_1_20cm_3_scaffold_295_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(17238..18020)
DNA (783bp) protein (261aa)
dch; dienoyl-CoA hydratase; K07537 cyclohexa-1,5-dienecarbonyl-CoA hydratase [EC:4.2.1.100] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Enoyl-CoA hydratase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIV9_9BACT
dch; dienoyl-CoA hydratase
13_1_20cm_3_scaffold_295_18
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(18051..18875)
DNA (825bp) protein (275aa)
coenzyme A transferase; K01040 glutaconate CoA-transferase, subunit B [EC:2.8.3.12] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Coenzyme A transferase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TTS3_DESML
coenzyme A transferase
13_1_20cm_3_scaffold_295_19
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(18909..19823)
DNA (915bp) protein (305aa)
PhaF protein; K15512 benzoyl-CoA 2,3-dioxygenase component B [EC:1.14.12.21] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Benzoyl-CoA oxygenase component B id=1975393 bin=GWD2_Deltaproteobacteria_55_8 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
boxB; benzoyl-CoA oxygenase subunit B
Displaying 19 items

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