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13_1_20cm_3_scaffold_304

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_304_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3..188)
DNA (186bp) protein (62aa)
tatC; Sec-independent protein translocase TatC; K03118 sec-independent protein translocase protein TatC Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_304_trna_1
unknown

Not on your lists

243..314
DNA (72bp)
transferRNA
13_1_20cm_3_scaffold_304_2
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

540..803
DNA (264bp) protein (88aa)
Putative membrane protein n=1 Tax=Frankia sp. QA3 RepID=I9KDL5_9ACTO
Putative membrane protein {ECO:0000313|EMBL:KJE25253.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
transglycosylase-associated protein
13_1_20cm_3_scaffold_304_3
unknown

Not on your lists

comp(845..946)
DNA (102bp) protein (34aa)

This feature has no annotations

13_1_20cm_3_scaffold_304_4
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1054..2316)
DNA (1263bp) protein (421aa)
Predicted ATPase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D5Z9_PELTS
Predicted ATPase {ECO:0000313|EMBL:BAF58328.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strain
ATPase
13_1_20cm_3_scaffold_304_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2346..2852
DNA (507bp) protein (169aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_304_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2910..5273
DNA (2364bp) protein (788aa)
Penicillin-binding protein, 1A family n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B6Z4_HERA2
1A family penicillin-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
1A family penicillin-binding protein
13_1_20cm_3_scaffold_304_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5307..6287
DNA (981bp) protein (327aa)
Polyprenyl synthetase n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WNA1_ACTMD
polyprenyl synthetase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
polyprenyl synthetase
13_1_20cm_3_scaffold_304_8
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

6287..6760
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVH3_9CHLR
hypothetical protein Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein
13_1_20cm_3_scaffold_304_9
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

6757..7173
DNA (417bp) protein (139aa)
hypothetical protein Tax=RBG_16_Armatimonadetes_67_12_curated
hypothetical protein id=14629807 bin=bin8_Chloro species=Catelliglobosispora koreensis genus=Catelliglobosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_1_20cm_3_scaffold_304_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7170..8165)
DNA (996bp) protein (332aa)
PSP1 domain protein n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GBH6_CHLAD
PSP1 domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PSP1 domain-containing protein
13_1_20cm_3_scaffold_304_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8162..9190)
DNA (1029bp) protein (343aa)
DNA polymerase III subunit tau and gamma; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
DNA polymerase III, delta prime subunit n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJD4_9CHLR
DNA polymerase III subunit delta'
13_1_20cm_3_scaffold_304_12
unknown

Not on your lists

comp(9215..9472)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_20cm_3_scaffold_304_13
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9469..10209)
DNA (741bp) protein (247aa)
arsM; arsenite S-adenosylmethyltransferase Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Methyltransferase type 11 id=4759444 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
arsM; arsenite S-adenosylmethyltransferase
13_1_20cm_3_scaffold_304_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10251..10640
DNA (390bp) protein (130aa)
ArsR family transcriptional regulator n=1 Tax=Streptomyces sp. AA0539 RepID=UPI0002D844B8
transcriptional regulator, ArsR family; K03892 ArsR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
transcription regulator ArsR
13_1_20cm_3_scaffold_304_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10630..11757)
DNA (1128bp) protein (376aa)
Glycosyl transferase group 1 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHR4_RHOM4
glycosyltransferase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
group 1 glycosyl transferase
13_1_20cm_3_scaffold_304_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11772..12917)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNS615 RepID=UPI0003609ADB
glycosyltransferase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
glycosyltransferase
13_1_20cm_3_scaffold_304_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(12946..13263)
DNA (318bp) protein (106aa)
HNH endonuclease Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
HNH endonuclease id=14628435 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
putative endonuclease
13_1_20cm_3_scaffold_304_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13458..14369
DNA (912bp) protein (304aa)
pdxS; pyridoxal biosynthesis lyase PdxS (EC:4.-.-.-) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EEA0_9CHLR
pyridoxal biosynthesis lyase PdxS
13_1_20cm_3_scaffold_304_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

14350..14958
DNA (609bp) protein (203aa)
SNO glutamine amidotransferase; K08681 glutamine amidotransferase [EC:2.6.-.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Glutamine amidotransferase subunit PdxT n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDF2_THET1
SNO glutamine amidotransferase
13_1_20cm_3_scaffold_304_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

14958..15944
DNA (987bp) protein (329aa)
id=3311667 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_304_21
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

15941..16594
DNA (654bp) protein (218aa)
methylase Tax=GWA2_Elusimicrobia_69_24_curated
Methyltransferase type 11 id=4879166 bin=GWA2_Elusimicrobia_69_24 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
methylase
13_1_20cm_3_scaffold_304_22
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

16719..18245
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EF79_9CHLR
single-stranded nucleic acid binding R3H domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ATPase-like protein
13_1_20cm_3_scaffold_304_23
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

18270..18803
DNA (534bp) protein (178aa)
thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
tmk; thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZ60_ANATU
13_1_20cm_3_scaffold_304_24
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

18935..19264
DNA (330bp) protein (110aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
hypothetical protein id=14628414 bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_1_20cm_3_scaffold_304_25
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19423..20562)
DNA (1140bp) protein (380aa)
LuxR family transcriptional regulator n=1 Tax=Salinispora pacifica RepID=UPI00037A875C
Large transcriptional regulator {ECO:0000313|EMBL:AJE85486.1}; TaxID=1888 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
large transcriptional regulator
13_1_20cm_3_scaffold_304_26
unknown

Not on your lists

comp(20504..20962)
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_20cm_3_scaffold_304_27
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21052..22599)
DNA (1548bp) protein (516aa)
Putative transcriptional regulator n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YYT5_NOCFA
Uncharacterized protein {ECO:0000313|EMBL:KJK44977.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Noc
transcriptional regulator
13_1_20cm_3_scaffold_304_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22733..23350)
DNA (618bp) protein (206aa)
LuxR family transcriptional regulator n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2X8T1_9NOCA
Regulatory protein LuxR {ECO:0000313|EMBL:AHG93458.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
regulatory protein LuxR
13_1_20cm_3_scaffold_304_29
unknown

Not on your lists

comp(23370..24110)
DNA (741bp) protein (247aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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