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13_1_20cm_3_scaffold_3397

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_3397_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2..439
DNA (438bp) protein (146aa)
Possible membrane associated protease n=1 Tax=Prochlorococcus marinus (strain MIT 9211) RepID=A9BED9_PROM4
hypothetical protein; K07052 Tax=RBG_16_Actinobacteria_68_12_curated
membrane-associated protease
13_1_20cm_3_scaffold_3397_2
unknown

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comp(436..783)
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_20cm_3_scaffold_3397_3
unknown

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841..1509
DNA (669bp) protein (223aa)

This feature has no annotations

13_1_20cm_3_scaffold_3397_4
unknown

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comp(1607..2323)
DNA (717bp) protein (239aa)

This feature has no annotations

13_1_20cm_3_scaffold_3397_5
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

2344..3072
DNA (729bp) protein (243aa)
hypothetical protein Tax=RBG_13_Chloroflexi_46_14_curated
13_1_20cm_3_scaffold_3397_6
unknown

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comp(3115..3549)
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_20cm_3_scaffold_3397_7
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3570..4439
DNA (870bp) protein (290aa)
Alpha/beta hydrolase fold protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F2N1_VERMA
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEB45296.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (
alpha/beta hydrolase fold protein
13_1_20cm_3_scaffold_3397_8
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4468..6900
DNA (2433bp) protein (811aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037840C2
Transketolase {ECO:0000313|EMBL:AKD04173.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
transketolase
13_1_20cm_3_scaffold_3397_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6900..7877
DNA (978bp) protein (326aa)
transketolase; K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
2-oxoisovalerate dehydrogenase beta subunit id=4899348 bin=GWC2_Chloroflexi_73_18 species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
transketolase
13_1_20cm_3_scaffold_3397_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7887..9350
DNA (1464bp) protein (488aa)
branched-chain alpha-keto acid dehydrogenase E2 component; K09699 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8EE02_9BACL
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
13_1_20cm_3_scaffold_3397_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9355..10302
DNA (948bp) protein (316aa)
lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Lipoyl synthase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=LIPA_RUBXD
lipoyl synthase
13_1_20cm_3_scaffold_3397_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10404..10940
DNA (537bp) protein (179aa)
lipoate-protein ligase B (EC:2.3.1.181); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Octanoyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=LIPB_SOLUE
lipoate-protein ligase B
13_1_20cm_3_scaffold_3397_13
unknown

Not on your lists

11091..11291
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_20cm_3_scaffold_3397_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11416..11712)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E1T1_9ACTN
GYD family protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
GYD family protein
13_1_20cm_3_scaffold_3397_15

Not on your lists

11749..12066
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A5E0E
Uncharacterized protein {ECO:0000313|EMBL:KKL55020.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_20cm_3_scaffold_3397_16
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

12308..13162
DNA (855bp) protein (285aa)
transmembrane_regions 4..21 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
transmembrane_regions 4..21 id=725386 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
13_1_20cm_3_scaffold_3397_17
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

13460..15133
DNA (1674bp) protein (558aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
Sensor protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EKR2_9CHLR
PAS domain-containing protein Tax=RBG_13_Actinobacteria_63_9_curated
13_1_20cm_3_scaffold_3397_18
Ustilaginoidea virens, Ustilaginoidea, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

comp(15381..16043)
DNA (663bp) protein (221aa)
Fibroin heavy chain Fib-H-like n=1 Tax=Oryza sativa subsp. japonica RepID=Q5JLN4_ORYSJ
Adhesin protein Mad1 {ECO:0000313|EMBL:KDB17741.1}; TaxID=1159556 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; mitosporic Hypocreale
hypothetical protein
13_1_20cm_3_scaffold_3397_19
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16603..17106
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037B5574
Uncharacterized protein {ECO:0000313|EMBL:AKB47074.1}; TaxID=1434099 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
intracellular alkaline serine proteinase
Displaying 19 items

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