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13_1_20cm_3_scaffold_351

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_351_1
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..227)
DNA (225bp) protein (75aa)
Efflux pump, RND family, membrane fusion protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EDL9_GEOBB
Efflux pump, RND family, membrane fusion protein {ECO:0000313|EMBL:ACH39215.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" so
RND family efflux pump membrane fusion protein
13_1_20cm_3_scaffold_351_2
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(259..1476)
DNA (1218bp) protein (406aa)
multidrug ABC transporter substrate-binding protein n=1 Tax=Synergistetes bacterium JGI 0000079-D21 RepID=UPI0003B6485F
export ABC transporter permease; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ABC transporter permease
13_1_20cm_3_scaffold_351_3

Not on your lists

comp(1884..3059)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036C0E4B
D-xylose transporter XylE {ECO:0000313|EMBL:AEQ20606.1}; TaxID=1091575 species="Bacteria; environmental samples.;" source="uncultured bacterium CSLF43.;"
sugar transporter
13_1_20cm_3_scaffold_351_4
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(3203..6460)
DNA (3258bp) protein (1086aa)
Alpha-mannosidase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFK1_9BACT rbh
Alpha-mannosidase {ECO:0000313|EMBL:BAL54937.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
alpha-mannosidase
13_1_20cm_3_scaffold_351_5
unknown

Not on your lists

comp(6544..6792)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_20cm_3_scaffold_351_6
unknown

Not on your lists

comp(6987..8759)
DNA (1773bp) protein (591aa)

This feature has no annotations

13_1_20cm_3_scaffold_351_7
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8960..10144)
DNA (1185bp) protein (395aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WZY5_ACISM
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:ADW68881.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicel
hypothetical protein
13_1_20cm_3_scaffold_351_8
unknown

Not on your lists

comp(10226..10984)
DNA (759bp) protein (253aa)

This feature has no annotations

13_1_20cm_3_scaffold_351_9
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11099..14920)
DNA (3822bp) protein (1274aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4DD4D rbh
Uncharacterized protein {ECO:0000313|EMBL:AEU37546.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC B
hypothetical protein
13_1_20cm_3_scaffold_351_10
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(15308..17797)
DNA (2490bp) protein (830aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000375E9F0
ASPIC/UnbV domain protein {ECO:0000313|EMBL:ADW68882.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain AT
ASPIC/UnbV domain-containing protein
13_1_20cm_3_scaffold_351_11
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

18373..18870
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003788EFE
hypothetical protein; K12600 superkiller protein 3 Tax=RBG_16_Chloroflexi_63_12_curated
hypothetical protein
13_1_20cm_3_scaffold_351_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(18727..20145)
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003698BB5
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ABF39451.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="
hypothetical protein
13_1_20cm_3_scaffold_351_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

20365..23124
DNA (2760bp) protein (920aa)
Lysine decarboxylase transcriptional regulator, CadC n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKQ5_KORVE rbh
Lysine decarboxylase transcriptional regulator, CadC {ECO:0000313|EMBL:ABF42545.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source=
lysine decarboxylase transcriptional regulator CadC
13_1_20cm_3_scaffold_351_14
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

23231..23587
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V5C5_TERSS
Uncharacterized protein {ECO:0000313|EMBL:ADV84884.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA
hypothetical protein
13_1_20cm_3_scaffold_351_15

Not on your lists

comp(23631..25241)
DNA (1611bp) protein (537aa)
Adenosine deaminase {ECO:0000313|EMBL:CBH99987.1}; EC=3.5.4.4 {ECO:0000313|EMBL:CBH99987.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000366750A rbh
adenosine deaminase
13_1_20cm_3_scaffold_351_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

25392..26465
DNA (1074bp) protein (358aa)
Purine nucleoside permease n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021R0_SOLUE rbh
Purine nucleoside permease {ECO:0000313|EMBL:ABJ84315.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" sour
purine nucleoside permease
13_1_20cm_3_scaffold_351_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(26651..27889)
DNA (1239bp) protein (413aa)
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:ABJ81376.1}; EC=3.5.1.87 {ECO:0000313|EMBL:ABJ81376.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Soliba
amidase (EC:3.5.1.87)
Amidase, hydantoinase/carbamoylase family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C40_SOLUE rbh
13_1_20cm_3_scaffold_351_18
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(27886..28632)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000380254E rbh
Uncharacterized protein {ECO:0000313|EMBL:ADW69897.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC
hypothetical protein
13_1_20cm_3_scaffold_351_19
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(28625..29890)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI000364A444
Strain A contig00056, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ54169.1}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiotherm
amidase
13_1_20cm_3_scaffold_351_20
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29929..30747)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2N0Z3_PSEU6
Uncharacterized protein {ECO:0000313|EMBL:EPL62747.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutz
hypothetical protein
13_1_20cm_3_scaffold_351_21
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30749..31093)
DNA (345bp) protein (115aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU3
5-hydroxyisourate hydrolase n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S2Y3_9DELT
transthyretin family protein
13_1_20cm_3_scaffold_351_22
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(31090..31602)
DNA (513bp) protein (171aa)
OHCU decarboxylase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UXZ7_TERSS
OHCU decarboxylase {ECO:0000313|EMBL:ADV84231.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853
OHCU decarboxylase
13_1_20cm_3_scaffold_351_23
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(31599..32477)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000371BD91 rbh
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein {ECO:0000313|EMBL:AFL87175.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Ter
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
13_1_20cm_3_scaffold_351_24
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(32474..32971)
DNA (498bp) protein (166aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZD58_TERRK
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein {ECO:0000313|EMBL:AFL87176.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terr
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
13_1_20cm_3_scaffold_351_25
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(32968..35049)
DNA (2082bp) protein (694aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZD59_TERRK
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein {ECO:0000313|EMBL:AFL87177.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terr
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
Displaying 25 items

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