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13_1_20cm_3_scaffold_3608

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_3608_1
unknown

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1..348
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_20cm_3_scaffold_3608_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(359..1189)
DNA (831bp) protein (277aa)
surE; stationary phase survival protein SurE (EC:3.1.3.5); K03787 5'-nucleotidase [EC:3.1.3.5] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
surE; 5'-nucleotidase (EC:3.1.3.5)
5'-nucleotidase SurE n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N1I7_ANATU
13_1_20cm_3_scaffold_3608_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1186..2421)
DNA (1236bp) protein (412aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NPU1_ROSCS
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_3_scaffold_3608_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2451..3485
DNA (1035bp) protein (345aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] id=14629421 bin=bin8_Chloro species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
threonine synthase
13_1_20cm_3_scaffold_3608_5
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3488..4120
DNA (633bp) protein (211aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
Homoserine kinase n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FRH5_ISOV2
Homoserine kinase
13_1_20cm_3_scaffold_3608_6
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

4332..4832
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI000362A3E5
LysM domain-containing protein Tax=CG_Anaero_02
sporulation/spore germination protein,spore germination protein, immunogloblin-like domain-containing
13_1_20cm_3_scaffold_3608_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4832..5590
DNA (759bp) protein (253aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] Tax=RIFCSPLOWO2_12_FUL
UPI0003D5C157 related cluster n=1 Tax=unknown RepID=UPI0003D5C157
biotin--acetyl-CoA-carboxylase ligase
13_1_20cm_3_scaffold_3608_8
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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5587..6453
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) PF9_SYMTH">RepID=Q67PF9_SYMTH
hypothetical protein
Tax=BJP_08E140C01_Anaerolineales_40_8
13_1_20cm_3_scaffold_3608_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6450..7301
DNA (852bp) protein (284aa)
acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] id=14629414 bin=bin8_Chloro species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
acetyl-CoA carboxyl transferase
13_1_20cm_3_scaffold_3608_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7324..7836
DNA (513bp) protein (171aa)
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_cura
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=2 Tax=sulfur-oxidizing symbionts RepID=G2DDA9_9GAMM
acetyl-CoA carboxylase carboxyltransferase subunit alpha
13_1_20cm_3_scaffold_3608_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7838..8239
DNA (402bp) protein (134aa)
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_cura
acetyl-CoA carboxylase, carboxyl transferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] id=14629413 bin=bin8_Chloro species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
acetyl-CoA carboxyl transferase
13_1_20cm_3_scaffold_3608_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8236..8649
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI000366CA5C
acetyl-CoA carboxylase, biotin carboxyl carrier protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Biotin carboxyl carrier protein of acetyl-CoA carboxylase
13_1_20cm_3_scaffold_3608_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8615..8914
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X6M4_METSD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_3_scaffold_3608_14
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(8911..9600)
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2B7_ANATU
hypothetical protein Tax=RBG_13_OP8X_37_8_curated
hypothetical protein
13_1_20cm_3_scaffold_3608_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9754..10701
DNA (948bp) protein (316aa)
malonyl CoA-ACP transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Malonyl CoA-acyl carrier protein transacylase id=2020196 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
malonyl CoA-acyl carrier protein transacylase
13_1_20cm_3_scaffold_3608_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10883..12196
DNA (1314bp) protein (438aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.1); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R7W4_AMMDK
acetyl-CoA carboxylase, biotin carboxylase
13_1_20cm_3_scaffold_3608_17
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(12250..13578)
DNA (1329bp) protein (443aa)
id=14631018 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_20cm_3_scaffold_3608_18
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(13671..14408)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000366B151
hypothetical protein Tax=RBG_16_Zixibacteria_40_9_curated
13_1_20cm_3_scaffold_3608_19
unknown

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comp(14500..15093)
DNA (594bp) protein (198aa)

This feature has no annotations

13_1_20cm_3_scaffold_3608_20
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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15583..18810
DNA (3228bp) protein (1076aa)
peptidase, S8/S53 family (EC:3.4.21.-) Tax=GWC2_RIF_CHLX_73_18_curated
peptidase, S8/S53 family (EC:3.4.21.-)
Peptidase S8 and S53 subtilisin kexin sedolisin id=4549172 bin=GWC2_Chloroflexi_73_18 species=Microbacterium laevaniformans genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
13_1_20cm_3_scaffold_3608_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

18884..19333
DNA (450bp) protein (150aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=FABZ_CHLAD
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase
13_1_20cm_3_scaffold_3608_22
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

19330..20259
DNA (930bp) protein (310aa)
arginase; K01476 arginase [EC:3.5.3.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Arginase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WS85_KYRT2
arginase
13_1_20cm_3_scaffold_3608_23
unknown

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20310..20468
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_20cm_3_scaffold_3608_24
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(20642..21310)
DNA (669bp) protein (223aa)
Ankyrin n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Q16_SOLUE
ankyrin Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ankyrin
13_1_20cm_3_scaffold_3608_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21506..21820
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Streptomyces sp. PsTaAH-124 RepID=UPI00037187BC
Regulatory protein MarR {ECO:0000313|EMBL:AHG92523.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
regulatory protein MarR
13_1_20cm_3_scaffold_3608_26
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21885..23435)
DNA (1551bp) protein (517aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0FSJ5_AMYMS
Uncharacterized protein {ECO:0000313|EMBL:AEK42083.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strai
hypothetical protein
Displaying 26 items

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