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13_1_20cm_3_scaffold_364

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_364_1
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(1..252)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BEA5_MEISD
Uncharacterized protein {ECO:0000313|EMBL:ADH64963.1}; Flags: Precursor;; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus sil
hypothetical protein
13_1_20cm_3_scaffold_364_2
unknown

Not on your lists

comp(263..448)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_20cm_3_scaffold_364_3
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(502..1122)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UIS8_9RHOB
Membrane protein {ECO:0000313|EMBL:KIC53738.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
hypothetical protein
13_1_20cm_3_scaffold_364_4
GWF2_OD1_36_839, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

1306..2331
DNA (1026bp) protein (342aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ16400.1}; TaxID=1618723 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2_36_839.;"
hypothetical protein id=5801244 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
13_1_20cm_3_scaffold_364_5
Pyrobaculum arsenaticum, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

2336..3043
DNA (708bp) protein (236aa)
Rhomboid family protein n=1 Tax=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) RepID=A4WHL3_PYRAR
Rhomboid family protein {ECO:0000313|EMBL:ABP49880.1}; TaxID=340102 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobaculum arsenaticum (st
rhomboid family protein
13_1_20cm_3_scaffold_364_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

3179..3829
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B566FE
transport-associated Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
osmotically inducible sensory protein
13_1_20cm_3_scaffold_364_7
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3875..4282
DNA (408bp) protein (136aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0FVZ9_AMYMS
Uncharacterized protein {ECO:0000313|EMBL:AEK43936.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strai
hypothetical protein
13_1_20cm_3_scaffold_364_8
unknown

Not on your lists

4308..4544
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_20cm_3_scaffold_364_9
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4585..4812)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037B412C
Uncharacterized protein {ECO:0000313|EMBL:AEK45104.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strai
hypothetical protein
13_1_20cm_3_scaffold_364_10
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4988..5698)
DNA (711bp) protein (237aa)
hydrolase n=1 Tax=Streptomyces prunicolor RepID=UPI00035E2D99
Hydrolase protein {ECO:0000313|EMBL:AEK45112.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699
hydrolase protein
13_1_20cm_3_scaffold_364_11
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5769..6671)
DNA (903bp) protein (301aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2NTM2_STRVO
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEM83380.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces
ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_3_scaffold_364_12
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6622..8028)
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI00037B71C8 rbh
EmrB/QacA subfamily drug resistance transporter Tax=RBG_16_Actinobacteria_64_13_curated
EmrB/QacA subfamily drug resistance transporter
13_1_20cm_3_scaffold_364_13
unknown

Not on your lists

8117..8311
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_20cm_3_scaffold_364_14
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8719..9201)
DNA (483bp) protein (161aa)
UspA domain protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VRE8_MEGEL
UspA domain protein {ECO:0000313|EMBL:CCC72393.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;
UspA domain protein
13_1_20cm_3_scaffold_364_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(9328..10884)
DNA (1557bp) protein (519aa)
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9C1_CONWI
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ADB49088.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobactera
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_20cm_3_scaffold_364_16
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10902..11813)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000380FE82
ABC transporter permease {ECO:0000313|EMBL:KFD44533.1}; TaxID=1523621 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;
binding-protein-dependent transport systems inner membrane component
13_1_20cm_3_scaffold_364_17
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11810..12787)
DNA (978bp) protein (326aa)
ABC transporter permease (Fragment) n=1 Tax=Bacillus sp. EGD-AK10 RepID=U2AE36_9BACI
ABC transporter permease {ECO:0000313|EMBL:ERI41376.1}; Flags: Fragment;; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
binding-protein-dependent transport systems inner membrane component
13_1_20cm_3_scaffold_364_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12851..14224)
DNA (1374bp) protein (458aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B6BF93
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERK72515.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 1
extracellular solute-binding protein family 1 protein
13_1_20cm_3_scaffold_364_19
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14352..15830)
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037BF711
Alpha-amylase {ECO:0000313|EMBL:EWM63855.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
alpha amylase catalytic subunit
13_1_20cm_3_scaffold_364_20
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16119..17135)
DNA (1017bp) protein (339aa)
LacI family transcription regulator n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B776_STRRD
LacI family transcriptional regulator {ECO:0000313|EMBL:KJK51831.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aeroco
HTH-type transcription regulator reg1
13_1_20cm_3_scaffold_364_21
unknown

Not on your lists

comp(17278..17691)
DNA (414bp) protein (138aa)

This feature has no annotations

13_1_20cm_3_scaffold_364_22
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17957..18808)
DNA (852bp) protein (284aa)
Non-haem bromoperoxidase BPO-A2 n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628950 rbh
Chloride peroxidase {ECO:0000313|EMBL:AEY85831.1}; TaxID=1133850 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jingg
chloride peroxidase
13_1_20cm_3_scaffold_364_23
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18898..19239)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E509_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN11238.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
13_1_20cm_3_scaffold_364_24
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

19416..19928
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F763_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB48834.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" sourc
hypothetical protein
13_1_20cm_3_scaffold_364_25
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20014..20286
DNA (273bp) protein (91aa)
Response regulator receiver protein n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UX47_MYCVA
Response regulator receiver protein {ECO:0000313|EMBL:EJZ09635.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae A
response regulator receiver protein
13_1_20cm_3_scaffold_364_26
unknown

Not on your lists

comp(20350..21261)
DNA (912bp) protein (304aa)

This feature has no annotations

Displaying 26 items

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