ggKbase home page

13_1_20cm_3_scaffold_3762

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_3762_1
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(2..214)
DNA (213bp) protein (71aa)
Galactokinase {ECO:0000313|EMBL:EFH83662.1}; EC=2.7.1.6 {ECO:0000313|EMBL:EFH83662.1};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobact
Galactokinase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTB1_9CHLR
GHMP kinase
13_1_20cm_3_scaffold_3762_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(201..1241)
DNA (1041bp) protein (347aa)
Inositol monophosphatase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTB0_9CHLR rbh
Inositol monophosphatase {ECO:0000313|EMBL:EFH83661.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter race
inositol monophosphatase
13_1_20cm_3_scaffold_3762_3
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(1238..2149)
DNA (912bp) protein (304aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU000506}; EC=2.7.7.12 {ECO:0000256|RuleBase:RU000506};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CH83_THET1
13_1_20cm_3_scaffold_3762_4
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2235..2750)
DNA (516bp) protein (172aa)
rbsA2; Ribose import ATP-binding protein RbsA 2 (EC:3.6.3.17)
Ribose ABC transport system, ATP-binding protein RbsA n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2P0L9_9PSEU
Ribose ABC transport system, ATP-binding protein RbsA {ECO:0000313|EMBL:EMD28549.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Am
13_1_20cm_3_scaffold_3762_5
bacterium UASB270, Bacteria

Not on your lists

comp(2714..3730)
DNA (1017bp) protein (339aa)
D-ribose transporter ATP binding protein n=1 Tax=Burkholderia kururiensis RepID=UPI00034683F6
Putative ribose/galactose/methyl galactoside import ATP-binding protein {ECO:0000313|EMBL:GAK60643.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
ABC transporter-like protein
13_1_20cm_3_scaffold_3762_6
bacterium UASB270, Bacteria

Not on your lists

comp(3727..4776)
DNA (1050bp) protein (350aa)
Putative ABC transporter, periplasmic solute-binding protein {ECO:0000313|EMBL:GAK60644.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
Putative ABC transporter, periplasmic solute-binding protein id=4616231 bin=GWC2_Clostridiales_40_7 species=Sinorhizobium medicae genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
putative ABC transporter, periplasmic solute-binding protein
13_1_20cm_3_scaffold_3762_7
bacterium UASB270, Bacteria

Not on your lists

comp(4814..5827)
DNA (1014bp) protein (338aa)
Inner-membrane translocator n=1 Tax=Thermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 / RKU-10) RepID=D2C6V6_THENR
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:GAK60645.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
inner-membrane translocator
13_1_20cm_3_scaffold_3762_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5805..8303)
DNA (2499bp) protein (833aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NQX2_GRAMM
Uncharacterized protein {ECO:0000313|EMBL:AHG92387.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF1680 rbh
13_1_20cm_3_scaffold_3762_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8391..10205)
DNA (1815bp) protein (605aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y0S0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AHG92386.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_3762_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10402..12636)
DNA (2235bp) protein (745aa)
Lipolytic enzyme, G-D-S-L family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024C3_SOLUE rbh
GDSL family lipase {ECO:0000313|EMBL:AHG92062.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
GDSL family lipase
13_1_20cm_3_scaffold_3762_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13073..14410
DNA (1338bp) protein (446aa)
hexuranate MFS transporter n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B73DF3
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AHG87912.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
major facilitator superfamily MFS_1
13_1_20cm_3_scaffold_3762_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14451..15692
DNA (1242bp) protein (414aa)
Mandelate racemase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZF1_SORCE rbh
Mandelate racemase {ECO:0000313|EMBL:AGP38602.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellul
mandelate racemase
13_1_20cm_3_scaffold_3762_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15728..17869
DNA (2142bp) protein (714aa)
Xylan alpha-1,2-glucuronidase {ECO:0000256|RuleBase:RU361198}; EC=3.2.1.131 {ECO:0000256|RuleBase:RU361198};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS
Alpha-glucuronidase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHL3_RHOM4
Glycosyl hydrolase 67 middle domain protein
13_1_20cm_3_scaffold_3762_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17877..19049
DNA (1173bp) protein (391aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=861299 species="Bacteria; Gemmati
Xylose isomerase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EUI0_9BACT
Xylose isomerase
13_1_20cm_3_scaffold_3762_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19977..20480
DNA (504bp) protein (168aa)
Xylulokinase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R060_PIRSD
Xylulokinase {ECO:0000313|EMBL:AHG92041.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
xylulokinase
13_1_20cm_3_scaffold_3762_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20477..21526
DNA (1050bp) protein (350aa)
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG87890.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ABC-type transporter, integral membrane subunit
Monosaccharide-transporting ATPase id=3865948 bin=GWF2_Lentisphaerae_50_93 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
13_1_20cm_3_scaffold_3762_17
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

21558..22478
DNA (921bp) protein (307aa)
putative ABC transporter substrate binding protein Tax=GWF2_Lentisphaerae_50_93_curated
Periplasmic binding protein/LacI transcriptional regulator id=3865949 bin=GWF2_Lentisphaerae_50_93 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S rbh
Periplasmic binding protein domain protein
Displaying 17 items

View Taxonomy