ggKbase home page

13_1_20cm_3_scaffold_378

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_378_1
unknown

Not on your lists

3..848
DNA (846bp) protein (282aa)

This feature has no annotations

13_1_20cm_3_scaffold_378_2
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(883..1440)
DNA (558bp) protein (186aa)
Nitroreductase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8J3_SPHTD
Nitroreductase {ECO:0000313|EMBL:ACZ40136.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaer
nitroreductase
13_1_20cm_3_scaffold_378_3
unknown

Not on your lists

1453..1662
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_20cm_3_scaffold_378_4
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

comp(1659..1847)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EHE1_9CHLR
Tax=BJP_IG2069_Chloroflexi_70_12
13_1_20cm_3_scaffold_378_5
unknown

Not on your lists

comp(2087..2686)
DNA (600bp) protein (200aa)

This feature has no annotations

13_1_20cm_3_scaffold_378_6
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2854..3453
DNA (600bp) protein (200aa)
Uncharacterized protein n=2 Tax=Sorangium cellulosum RepID=S4XQP1_SORCE
16S rRNA (Adenine(1408)-N(1))-methyltransferase {ECO:0000313|EMBL:CDO27110.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacteriu
hypothetical protein
13_1_20cm_3_scaffold_378_7
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3509..4279
DNA (771bp) protein (257aa)
carboxymethylenebutenolidase (EC:3.1.1.45)
Dienelactone hydrolase n=1 Tax=Rhodococcus opacus RepID=Q8G9L2_RHOOP
Dienelactone hydrolase family protein {ECO:0000313|EMBL:KJF24633.1}; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;"
13_1_20cm_3_scaffold_378_8
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(4276..4764)
DNA (489bp) protein (163aa)
id=14630271 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=CSP1_4_Chloroflexi
13_1_20cm_3_scaffold_378_9
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(4834..5316)
DNA (483bp) protein (161aa)
hypothetical protein Tax=RBG_16_Chloroflexi_56_8_curated
13_1_20cm_3_scaffold_378_10

Not on your lists

comp(5552..6292)
DNA (741bp) protein (247aa)
Putative HNH endonuclease 2 n=1 Tax=Bacillus phage BCU4 RepID=J9PQQ3_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:KKN26716.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
HNH endonuclease
13_1_20cm_3_scaffold_378_trna_1
unknown

Not on your lists

6650..6722
DNA (73bp)
transferRNA
13_1_20cm_3_scaffold_378_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6771..7253
DNA (483bp) protein (161aa)
MaoC-like dehydratase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
MaoC-like dehydratase
MaoC domain protein dehydratase id=1921103 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_20cm_3_scaffold_378_12
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7256..8425
DNA (1170bp) protein (390aa)
acyl-CoA dehydrogenase domain-containing protein Tax=GWD2_Deltaproteobacteria_55_8_curated
Acyl-CoA dehydrogenase domain protein id=1921104 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria rbh
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_3_scaffold_378_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8425..9375
DNA (951bp) protein (317aa)
citrate lyase subunit beta (EC:4.1.3.6); K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
citrate lyase beta subunit (EC:4.1.3.6)
Citrate lyase, beta subunit id=1921107 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfosporosinus orientis genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_20cm_3_scaffold_378_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9879..10196
DNA (318bp) protein (106aa)
Cupin domain protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F6G2_ACIC5
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:AHG93876.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Cupin 2 conserved barrel domain protein
13_1_20cm_3_scaffold_378_15
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10196..10714
DNA (519bp) protein (173aa)
flavin reductase-like, FMN-binding (EC:1.14.14.9)
Flavin reductase-like, FMN-binding n=2 Tax=Saccharopolyspora erythraea RepID=A4FJG9_SACEN
NADH-FMN oxidoreductase {ECO:0000313|EMBL:CEL13357.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-N
13_1_20cm_3_scaffold_378_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10715..11623
DNA (909bp) protein (303aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconateDelta-isomerase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFU7_THET1
13_1_20cm_3_scaffold_378_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

11624..12277
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZU02_DESOH
hypothetical protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
hypothetical protein
13_1_20cm_3_scaffold_378_18
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

12700..13404
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI00035C31CC
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KIE12487.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.
aldehyde dehydrogenase (NAD) family protein
Displaying 19 items

View Taxonomy