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13_1_20cm_3_scaffold_409

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_409_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..834)
DNA (834bp) protein (278aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Putative fatty acid-CoA ligase n=1 Tax=uncultured Acidobacteria bacterium cosmid p2H8 RepID=B1NMD2_9BACT
AMP-dependent synthetase and ligase
13_1_20cm_3_scaffold_409_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

990..1949
DNA (960bp) protein (320aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PRG1_MEIRD
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_3_scaffold_409_3
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(1932..2213)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00037C54C3
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
hypothetical protein
13_1_20cm_3_scaffold_409_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2268..2768)
DNA (501bp) protein (167aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93118.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_3_scaffold_409_5
Bacteria

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comp(2917..3633)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI000368A009
13_1_20cm_3_scaffold_409_6
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3733..4005)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI0003662952
Uncharacterized protein {ECO:0000313|EMBL:KFA93200.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
13_1_20cm_3_scaffold_409_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4204..4473)
DNA (270bp) protein (90aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG90137.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_3_scaffold_409_8
unknown

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comp(4686..5033)
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_20cm_3_scaffold_409_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5310..5627
DNA (318bp) protein (106aa)
solA; N-methyltryptophan oxidase (EC:1.5.3.1); K00301 sarcosine oxidase [EC:1.5.3.1] id=24476656 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
FAD dependent oxidoreductase {ECO:0000313|EMBL:AHG93512.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
FAD dependent oxidoreductase
13_1_20cm_3_scaffold_409_10
unknown

Not on your lists

comp(5641..6129)
DNA (489bp) protein (163aa)

This feature has no annotations

13_1_20cm_3_scaffold_409_11
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6210..6503)
DNA (294bp) protein (98aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
GYD family protein
hypothetical protein id=14627895 bin=bin7_NC10_sister species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
13_1_20cm_3_scaffold_409_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6570..7427)
DNA (858bp) protein (286aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJG1_RHOM4
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AHG92307.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Xylose isomerase domain-containing protein TIM barrel
13_1_20cm_3_scaffold_409_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7562..8920
DNA (1359bp) protein (453aa)
Oxidoreductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP74_KORVE
Oxidoreductase domain protein {ECO:0000313|EMBL:AHG92323.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
oxidoreductase domain protein
13_1_20cm_3_scaffold_409_14
unknown

Not on your lists

comp(8952..9134)
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_20cm_3_scaffold_409_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9177..10187)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLR5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF14782.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
hypothetical protein
13_1_20cm_3_scaffold_409_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(10139..10855)
DNA (717bp) protein (239aa)
Twin-arginine translocation pathway signal n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB94_NIAKG
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
twin-arginine translocation pathway signal
13_1_20cm_3_scaffold_409_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10868..12547)
DNA (1680bp) protein (560aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACE6_GEMAT rbh
GMC oxidoreductase {ECO:0000313|EMBL:AHG92304.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
GMC oxidoreductase
13_1_20cm_3_scaffold_409_18
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12644..13330)
DNA (687bp) protein (229aa)
membrane protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00035E663B
Membrane protein {ECO:0000313|EMBL:AJC46921.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
membrane protein
13_1_20cm_3_scaffold_409_19
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13337..14239)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003623CF0
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP68521.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
ROK family protein
13_1_20cm_3_scaffold_409_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14239..15345)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036F9451
Oxidoreductase domain protein {ECO:0000313|EMBL:AHG93490.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
oxidoreductase domain protein
13_1_20cm_3_scaffold_409_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15541..16752
DNA (1212bp) protein (404aa)
Acetyl-CoA acetyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X1_GEMAT
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AHG90537.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
acetyl-CoA acetyltransferase
13_1_20cm_3_scaffold_409_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16801..17625
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X2_GEMAT
Abortive infection protein {ECO:0000313|EMBL:AHG90538.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Abortive infection protein
13_1_20cm_3_scaffold_409_23
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17622..18473
DNA (852bp) protein (284aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:BAH38333.1}; EC=1.1.1.157 {ECO:0000313|EMBL:BAH38333.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemma
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X3_GEMAT
13_1_20cm_3_scaffold_409_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18482..19645
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X4_GEMAT
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:AHG90540.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_3_scaffold_409_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19672..20706
DNA (1035bp) protein (345aa)
Leucine dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X5_GEMAT
Glu/Leu/Phe/Val dehydrogenase {ECO:0000313|EMBL:AHG90541.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Glu/Leu/Phe/Val dehydrogenase
13_1_20cm_3_scaffold_409_26
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20703..21143
DNA (441bp) protein (147aa)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:BAH38336.1}; EC=5.3.1.6 {ECO:0000313|EMBL:BAH38336.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatim
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X6_GEMAT
Displaying 26 items

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