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13_1_20cm_3_scaffold_4152

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_4152_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2..487)
DNA (486bp) protein (162aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MJF5_9PROT
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
13_1_20cm_3_scaffold_4152_2
unknown

Not on your lists

498..1739
DNA (1242bp) protein (414aa)

This feature has no annotations

13_1_20cm_3_scaffold_4152_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1725..2621)
DNA (897bp) protein (299aa)
Signal recognition particle receptor FtsY n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRW8_9GAMM
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ftsY; cell division protein FtsY
13_1_20cm_3_scaffold_4152_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2789..6193)
DNA (3405bp) protein (1135aa)
RecF/RecN/SMC N-terminal domain-containing protein; K03529 chromosome segregation protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Chromosome partition protein Smc id=3811512 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
chromosome segregation protein SMC
13_1_20cm_3_scaffold_4152_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6190..6441)
DNA (252bp) protein (84aa)
rnc; ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HKX5_GLUDA
13_1_20cm_3_scaffold_4152_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6470..6757)
DNA (288bp) protein (96aa)
rnc; ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X2M7_DESRD
13_1_20cm_3_scaffold_4152_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6838..7068)
DNA (231bp) protein (77aa)
acpP; acyl carrier protein; K02078 acyl carrier protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
acyl carrier protein id=14628955 bin=bin8_Chloro species=Piscirickettsia salmonis genus=Piscirickettsia taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
acyl carrier protein
13_1_20cm_3_scaffold_4152_8
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7134..7622
DNA (489bp) protein (163aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DK85_9FIRM
RNA polymerase sigma24 factor {ECO:0000313|EMBL:EQD87695.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora eryt
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_3_scaffold_4152_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7619..9109
DNA (1491bp) protein (497aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_4152_10
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

comp(9106..9540)
DNA (435bp) protein (145aa)
N utilization substance protein B homolog n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMC8_9CHLR
nusB; antitermination protein NusB; K03625 N utilization substance protein B Tax=RBG_16_Chloroflexi_64_43_curated
NusB antitermination factor
13_1_20cm_3_scaffold_4152_11
Desulfosporosinus sp. HMP52, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9537..10532)
DNA (996bp) protein (332aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Desulfosporosinus sp. OT RepID=G2FUP7_9FIRM
phosphate:acyl-(acyl carrier protein) acyltransferase
13_1_20cm_3_scaffold_4152_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10797..11339)
DNA (543bp) protein (181aa)
hypothetical protein; K07040 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein; K07040 uncharacterized protein id=14628950 bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_1_20cm_3_scaffold_4152_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11361..11840)
DNA (480bp) protein (160aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ATPase subunit H id=14628949 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
vacuolar-type H+-ATPase subunit H
13_1_20cm_3_scaffold_4152_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11890..14553)
DNA (2664bp) protein (888aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2A2_THERP
13_1_20cm_3_scaffold_4152_15
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14550..15494)
DNA (945bp) protein (315aa)
NADH-ubiquinone oxidoreductase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B3AA0B rbh
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:KJC65194.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
nucleoside-diphosphate-sugar epimerase
13_1_20cm_3_scaffold_4152_16
Streptomyces aureofaciens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15491..15799)
DNA (309bp) protein (103aa)
ArsR family transcriptional regulator n=1 Tax=Streptomyces RepID=UPI00035FBDD3
ArsR family transcriptional regulator {ECO:0000313|EMBL:AIE42015.1}; TaxID=1894 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aureofacien
srnR; ArsR family transcriptional regulator
13_1_20cm_3_scaffold_4152_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15915..16469)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Caldibacillus debilis RepID=UPI00036F768A
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:EFB76360.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variab
hypothetical protein
13_1_20cm_3_scaffold_4152_18
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(16466..17218)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I8N9_CALAS
Uncharacterized protein {ECO:0000313|EMBL:BAM01627.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
hypothetical protein
13_1_20cm_3_scaffold_4152_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

17259..17678
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
seg 34..45 id=129507 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Displaying 19 items

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