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13_1_20cm_3_scaffold_500

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_500_1

Not on your lists

2..127
DNA (126bp) protein (42aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM70338.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_3_scaffold_500_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

192..1151
DNA (960bp) protein (320aa)
phosphomannomutase (EC:5.4.2.8); K01840 phosphomannomutase [EC:5.4.2.8] Tax=RBG_16_Actinobacteria_68_12_curated
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase n=1 Tax=Patulibacter medicamentivorans RepID=H0EAU6_9ACTN
13_1_20cm_3_scaffold_500_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1151..1465
DNA (315bp) protein (105aa)
phosphomannomutase (EC:5.4.2.8); K01840 phosphomannomutase [EC:5.4.2.8] Tax=RBG_16_Actinobacteria_68_12_curated
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDX7_CONWI
13_1_20cm_3_scaffold_500_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1612..1902
DNA (291bp) protein (97aa)
tol-pal system-associated acyl-CoA thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RBG_16_Actinobacteria_68_12_curated
Uncharacterized protein id=1843734 bin=GWA2_Elusimicrobia_66_18 species=Flavobacterium columnare genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
thioesterase superfamily protein
13_1_20cm_3_scaffold_500_5
unknown

Not on your lists

1899..2198
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_20cm_3_scaffold_500_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2465..4672)
DNA (2208bp) protein (736aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RBG_16_Actinobacteria_68_12_curated
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDZ0_CONWI
13_1_20cm_3_scaffold_500_7
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(4851..5363)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZXR0_9ACTN
N-acetyltransferase GCN5 Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein
13_1_20cm_3_scaffold_500_8
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(5360..7213)
DNA (1854bp) protein (618aa)
single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RBG_16_Actinobacteria_67_10_curated
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY9_CONWI
single-stranded-DNA-specific exonuclease RecJ
13_1_20cm_3_scaffold_500_9
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

7558..10140
DNA (2583bp) protein (861aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I9Q4_MYCRH
Tax=RBG_16_Actinobacteria_67_15_curated
13_1_20cm_3_scaffold_500_10
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

10127..11248
DNA (1122bp) protein (374aa)
class V aminotransferase; K04127 isopenicillin-N epimerase [EC:5.1.1.17] Tax=RBG_16_Chloroflexi_63_12_curated
Aminotransferase, class V n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UT24_ROSS1 rbh
class V aminotransferase
13_1_20cm_3_scaffold_500_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11249..11446)
DNA (198bp) protein (66aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_3_scaffold_500_12
unknown

Not on your lists

comp(11513..11791)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_20cm_3_scaffold_500_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

11817..12272
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B4A039
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein
13_1_20cm_3_scaffold_500_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

12269..12973
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GR25_METAL
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_3_scaffold_500_15
unknown

Not on your lists

comp(13260..13568)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_20cm_3_scaffold_500_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13583..14599)
DNA (1017bp) protein (339aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4); K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RBG_16_Actinobacteria_68_12_curated
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY4_CONWI
Holliday junction DNA helicase RuvB
13_1_20cm_3_scaffold_500_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14601..15167)
DNA (567bp) protein (189aa)
Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RBG_16_Actinobacteria_68_12_curated
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY3_CONWI
Holliday junction DNA helicase RuvA
13_1_20cm_3_scaffold_500_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15164..15652)
DNA (489bp) protein (163aa)
Holliday junction endonuclease RuvC (EC:3.1.22.4) Tax=RBG_16_Actinobacteria_68_12_curated
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY2_CONWI
13_1_20cm_3_scaffold_500_19
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15689..16309
DNA (621bp) protein (207aa)
FHA domain-containing protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C6Z7_MYXFH
Adenylate cyclase {ECO:0000313|EMBL:AFE06061.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Coralloco
adenylate cyclase
13_1_20cm_3_scaffold_500_20
unknown

Not on your lists

16638..16808
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_20cm_3_scaffold_500_21
unknown

Not on your lists

16830..17042
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_20cm_3_scaffold_500_22
unknown

Not on your lists

17053..17265
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_20cm_3_scaffold_500_23
unknown

Not on your lists

17283..17492
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_20cm_3_scaffold_500_24
unknown

Not on your lists

17495..17704
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_20cm_3_scaffold_500_25
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17766..19649
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JZY9_ARTS2
Tat (Twin-arginine translocation) pathway signal sequence domain protein {ECO:0000313|EMBL:CCQ44913.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" s
hypothetical protein
13_1_20cm_3_scaffold_500_26
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19594..20142
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JXW9_SACES
Uncharacterized protein {ECO:0000313|EMBL:CCH30157.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strai
hypothetical protein
13_1_20cm_3_scaffold_500_27
unknown

Not on your lists

20139..20906
DNA (768bp) protein (256aa)

This feature has no annotations

13_1_20cm_3_scaffold_500_28
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(20908..21660)
DNA (753bp) protein (251aa)
Probable transcriptional regulatory protein Rxyl_1318 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Y1318_RUBXD
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein
13_1_20cm_3_scaffold_500_29
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(21647..22150)
DNA (504bp) protein (168aa)
SNO glutamine amidotransferase; K08681 glutamine amidotransferase [EC:2.6.-.-] Tax=RBG_16_Actinobacteria_68_12_curated
Glutamine amidotransferase subunit PdxT n=2 Tax=Paenibacillus polymyxa RepID=E0R9D4_PAEP6
hypothetical protein
13_1_20cm_3_scaffold_500_30
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

22230..23381
DNA (1152bp) protein (384aa)
Glycosyl hydrolase BNR repeat-containing protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KT52_HALH1
glycosyl hydrolase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 30 items

View Taxonomy