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13_1_20cm_3_scaffold_5150

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_5150_1
unknown

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1..177
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_20cm_3_scaffold_5150_2
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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301..2634
DNA (2334bp) protein (778aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J917_ANAD2
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ACL63615.1}; Flags: Precursor;; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; A
peptidase S8/S53 subtilisin kexin sedolisin
13_1_20cm_3_scaffold_5150_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2645..3256)
DNA (612bp) protein (204aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88836.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_3_scaffold_5150_4
unknown

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comp(3364..3693)
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_20cm_3_scaffold_5150_5
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3690..4358)
DNA (669bp) protein (223aa)
Fumarate and nitrate reduction regulatory protein n=2 Tax=Alcaligenes RepID=M5J3D4_9BURK
Transcriptional regulator {ECO:0000313|EMBL:ERI33940.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EG
crp-like helix-turn-helix domain protein
13_1_20cm_3_scaffold_5150_6
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(4478..6328)
DNA (1851bp) protein (617aa)
signal transduction histidine kinase, nitrogen specific, NtrB Tax=GWC2_RIF_CHLX_73_18_curated
PAS/PAC sensor hybrid histidine kinase id=4822538 bin=GWC2_Chloroflexi_73_18 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PAS domain S-box
13_1_20cm_3_scaffold_5150_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(6463..7722)
DNA (1260bp) protein (420aa)
diguanylate cyclase Tax=CSP1_5_NC10
diguanylate cyclase id=14431325 bin=bin3_NC10 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Conserved protein of unknown function (membrane protein with a C-terminal Diguanylate cyclase domain)
13_1_20cm_3_scaffold_5150_trna_1
unknown

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7803..7875
DNA (73bp)
transferRNA
13_1_20cm_3_scaffold_5150_trna_2
unknown

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7948..8019
DNA (72bp)
transferRNA
13_1_20cm_3_scaffold_5150_trna_3
unknown

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8173..8245
DNA (73bp)
transferRNA
13_1_20cm_3_scaffold_5150_8
unknown

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8344..8463
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_20cm_3_scaffold_5150_9
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8555..9958)
DNA (1404bp) protein (468aa)
Signal transduction histidine kinase containing a receiver domain (Hybrid) and PAS sensor domains {ECO:0000313|EMBL:CAJ96328.1}; EC=2.7.3.- {ECO:0000313|EMBL:CAJ96328.1};; TaxID=381666 species="Bacter
Signal transduction histidine kinase containing a receiver domain (Hybrid) and PAS sensor domains n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K0Z6_CUPNH
chemotaxis protein CheY
13_1_20cm_3_scaffold_5150_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10061..11134
DNA (1074bp) protein (358aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
murB; UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FBA3_SORC5
13_1_20cm_3_scaffold_5150_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11143..12306)
DNA (1164bp) protein (388aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacte
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIV4_KORVE
sensor histidine kinase
13_1_20cm_3_scaffold_5150_trna_4
unknown

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12443..12524
DNA (82bp)
transferRNA
13_1_20cm_3_scaffold_5150_12
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12590..14158)
DNA (1569bp) protein (523aa)
Radical SAM domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T982_NIAKG rbh
radical SAM protein Tax=RBG_13_Deltaproteobacteria_52_11_curated
Elongator protein 3/MiaB/NifB
13_1_20cm_3_scaffold_5150_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14216..15625)
DNA (1410bp) protein (470aa)
MATE efflux family protein n=1 Tax=uncultured bacterium 66 RepID=E3T665_9BACT
MatE family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
MATE efflux family protein
13_1_20cm_3_scaffold_5150_14
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(15606..16019)
DNA (414bp) protein (138aa)
DoxX family protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4ULK1_ANASK
DoxX; K15977 putative oxidoreductase Tax=RBG_13_Acidobacteria_68_16_curated
DoxX family protein
13_1_20cm_3_scaffold_5150_15
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16016..16864)
DNA (849bp) protein (283aa)
UPI0003CFE58C related cluster n=1 Tax=unknown RepID=UPI0003CFE58C
5'-3' exonuclease {ECO:0000313|EMBL:ESZ21479.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C0
5'-3' exonuclease
13_1_20cm_3_scaffold_5150_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16877..17245)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037A3308
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABF41720.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_3_scaffold_5150_17
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(17245..17880)
DNA (636bp) protein (212aa)
RNA polymerase subunit sigma-24 Tax=CSP1_3_Armatimonadetes
RNA polymerase subunit sigma-24 id=14631940 bin=bin9_gal15 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
ECF subfamily RNA polymerase sigma factor
13_1_20cm_3_scaffold_5150_18
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(18480..18824)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ECP7_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF82459.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_1_20cm_3_scaffold_5150_19
RLO_PLX_64_10, Bacteria

Not on your lists

comp(18886..19182)
DNA (297bp) protein (99aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein id=14428964 bin=bin3_NC10 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_20cm_3_scaffold_5150_20
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(19179..19322)
DNA (144bp) protein (48aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000367A79D
glycosyl hydrolase family protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
glycosyl hydrolase
Displaying 24 items

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