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13_1_20cm_3_scaffold_5171

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_5171_1
unknown

Not on your lists

comp(3..791)
DNA (789bp) protein (263aa)

This feature has no annotations

13_1_20cm_3_scaffold_5171_2
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(824..1516)
DNA (693bp) protein (231aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2N4_THERP
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
13_1_20cm_3_scaffold_5171_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1522..1845)
DNA (324bp) protein (108aa)
GMP reductase (EC:1.7.1.7); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Inosine-5'-monophosphate dehydrogenase id=3475065 bin=GWF2_Clostridiales_38_85 species=Clostridium leptum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GuaB; IMP dehydrogenase
13_1_20cm_3_scaffold_5171_4
unknown

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comp(1933..2256)
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_20cm_3_scaffold_5171_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2269..3531)
DNA (1263bp) protein (421aa)
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Adenylosuccinate synthetase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TEN4_9CHLR rbh
adenylosuccinate synthetase
13_1_20cm_3_scaffold_5171_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3543..4124)
DNA (582bp) protein (194aa)
exported protein of unknown function Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein cdiviTM7_02994 id=3174055 bin=GWC1_CPR2_39_9 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
exported protein of unknown function
13_1_20cm_3_scaffold_5171_7
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4158..4469)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0FC45_DESDL
Uncharacterized protein {ECO:0000313|EMBL:AGA70797.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroe
hypothetical protein
13_1_20cm_3_scaffold_5171_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(4622..5536)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TH40_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH90782.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
hypothetical protein
13_1_20cm_3_scaffold_5171_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5593..6504)
DNA (912bp) protein (304aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
NAD-dependent epimerase/dehydratase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9X1_SPHTD
NAD-dependent epimerase/dehydratase
13_1_20cm_3_scaffold_5171_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6696..8024
DNA (1329bp) protein (443aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] id=14629388 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
replicative DNA helicase
13_1_20cm_3_scaffold_5171_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8021..9349
DNA (1329bp) protein (443aa)
dnaB; replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] id=14629388 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
dnaB; replicative DNA helicase
13_1_20cm_3_scaffold_5171_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(9306..9773)
DNA (468bp) protein (156aa)
50S ribosomal protein L9 n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M068_CLOCD
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
50S ribosomal protein L9P
13_1_20cm_3_scaffold_5171_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9780..9959)
DNA (180bp) protein (60aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_5171_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9956..10396)
DNA (441bp) protein (147aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=14629383 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_1_20cm_3_scaffold_5171_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10386..11153)
DNA (768bp) protein (256aa)
MscS Mechanosensitive ion channel n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XPK7_STAC7
mechanosensitive ion channel protein MscS Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
MscS Mechanosensitive ion channel
13_1_20cm_3_scaffold_5171_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11217..11828
DNA (612bp) protein (204aa)
LexA family transcriptional repressor; K01356 repressor LexA [EC:3.4.21.88] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
SOS regulatory protein LexA id=2486243 bin=GWC2_Chloroflexi_73_18 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
transcriptional repressor, lexa family
13_1_20cm_3_scaffold_5171_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11841..12959
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GSU9_SORC5
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_3_scaffold_5171_18
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12956..14083
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D7P5_MYXXD
Uncharacterized protein {ECO:0000313|EMBL:ABF87250.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
hypothetical protein
13_1_20cm_3_scaffold_5171_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

14080..15285
DNA (1206bp) protein (402aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7) id=14629386 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
DNA-directed DNA polymerase (EC:2.7.7.7)
13_1_20cm_3_scaffold_5171_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

15368..15703
DNA (336bp) protein (112aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=1242092 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
13_1_20cm_3_scaffold_5171_21
unknown

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comp(15707..15985)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_20cm_3_scaffold_5171_trna_1
unknown

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15815..15888
DNA (74bp)
transferRNA
13_1_20cm_3_scaffold_5171_22
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

16481..16837
DNA (357bp) protein (119aa)
Uncharacterized protein Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
13_1_20cm_3_scaffold_5171_23
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

16930..18423
DNA (1494bp) protein (498aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
LysM domain/M23/M37 peptidase domain protein id=1740426 bin=GWD2_Nitrospirae-related_57_8 species=Anaerobaculum hydrogeniformans genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
NlpD6; metalloendopeptidase-like membrane protein
13_1_20cm_3_scaffold_5171_24
unknown

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18433..18966
DNA (534bp) protein (178aa)

This feature has no annotations

13_1_20cm_3_scaffold_5171_25
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

19159..20520
DNA (1362bp) protein (454aa)
amidase (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RBG_16_Chloroflexi_68_14_curated
Amidase (EC:3.5.1.4)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAY8_SPHTD
13_1_20cm_3_scaffold_5171_26
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

20695..21258
DNA (564bp) protein (188aa)
HAD family hydrolase n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A3BF5B
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
metal dependent phosphohydrolase
13_1_20cm_3_scaffold_5171_27
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(21557..21814)
DNA (258bp) protein (86aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_5171_28
unknown

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comp(21959..22060)
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 29 items

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